Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02025 ATGAACGGAGGCCCATCTGGTTTCACAAATGCTCCCGTCACAAGGGCTTTCATCATCGCCTCTGCGCTATTCACAATATTCTTTGGGATCCAGGGTCGTTTCAACACTCTGGGGTTGTCTTATCAGGATATTTTCGGAAAGCTTCGCTTTTGGAAGTTGATTATGTCCATATTTTCCTTCACATCAACGCCGGAGTTGATGTTTGGACTATATCTACTATATTATTTCAGGGTATTTGAGAGACAAATCGGTTCCAATAAATACTCAGTGTTTATTGTGTTCTCCATATTATCTTCGCTACTGTTTGAGGTATTTTCTGTAGCACTTTTAAAAGATCCTACAGCAACCCTAGTCACTCCCGGACCTTATGGCCTTATATTTGCTTCATTTGTACCCTTTTTCTTTGACATTCCCGTTTCAACACGGTTCCGCTTATTTGGTTTCCACTTCTCAGATAAGTCATTCATATATCTAGCTGGTCTTCAGCTTCTATTGTCTTCATGGAAAAGGTCCATCTTACCAGGGTTGTGCGGCATCCTTGCTGGTTCCGTATACCGTTTGAATGTCTTATATATCCGCAAAGCAAAGTTCCCGGAGTTTATTTCATCATTCTTTTCACGAATTTCCTTGCCATCTATGGGGAGTCCGCGGCCAACATCAACAAGGAATGTTGTGGGAAGTGTACCCTCCTACCCAGCTCGCCAAATGGAGAGAAACTATCCAATGCATTCTGCAGTAGAACCATCCGAGGACTCAATCACGACCCTTGTTTCAATGGGATTTGACAGGAATTCGGCAAGACAAGCCCTAGTGCAGGCGAGAAATGACGTCAATGTTGCAACAAACATCCTACTAGAGGCACAGTCCCACTAA 873 0.433 MNGGPSGFTNAPVTRAFIIASALFTIFFGIQGRFNTLGLSYQDIFGKLRFWKLIMSIFSFTSTPELMFGLYLLYYFRVFERQIGSNKYSVFIVFSILSSLLFEVFSVALLKDPTATLVTPGPYGLIFASFVPFFFDIPVSTRFRLFGFHFSDKSFIYLAGLQLLLSSWKRSILPGLCGILAGSVYRLNVLYIRKAKFPEFISSFFSRISLPSMGSPRPTSTRNVVGSVPSYPARQMERNYPMHSAVEPSEDSITTLVSMGFDRNSARQALVQARNDVNVATNILLEAQSH 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02025 290 SUPERFAMILY UBA-like 244 287 IPR009060 GO:0005515
Car03g02025 290 Pfam UBA/TS-N domain 249 284 IPR015940 -
Car03g02025 290 Gene3D - 9 188 IPR035952 -
Car03g02025 290 SUPERFAMILY Rhomboid-like 11 187 IPR035952 -
Car03g02025 290 Gene3D - 219 289 - -
Car03g02025 290 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 247 287 IPR015940 -
Car03g02025 290 SMART uba_6 249 286 IPR015940 -
Car03g02025 290 Pfam Rhomboid family 49 188 IPR022764 GO:0004252|GO:0016021
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02025 K25216 - gmx:100805217 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02025 03 66439883 66445395 Car03g02025 03 66439883 66445395 ECH