Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02018 ATGTATAAAATTGTGCAAAGGCTGCGATTCTCGAATCGTGCACCACTTCTAACACACTCACACTTTGAACAATCGCAATTTGTTTCAGATTTTTCAAGCCATGCTACCTTTGACACAGATCCAACAATTTCATCTTATGCTACCACTGATAGAGTTCGCAGGGTTGAATCTCTTGACTTTAGGGAAATTACAAACAGACGAGAGCTTACGAACGCATTTGATAAATACAATATAAACATTTTATCTGGATGGTTGAACTGGACTTCGAGGGCAAATGATAATCATCATGGTGCTAACTATGTGGTAAACCGTCATTTTAAAACTGATCGCAAGGATAGATGCACAAAGGAGTTCTCACGTAAGTTTCTTGAAAATGTTCCAGATTTTGTAAAGATAGTGGAGGTTGGTCCAAGGGATGGATTGCAAAATGAGAAGGTTATTGTTCCAACTGATGTGAAAATTGAATTGATAAAACTGCTAGTTTCTTCTGGGTTGTCTGTTGTTGAGGCGACAAGTTTTGTCTCACCAAAATGGGTGCCACAGTTAGCTGATGCAAAGGATGTATTGGCAGCAATTCGAAACGTTGAAGGTGCTAGCTTTCCTGTTTTAACTCCAAACCTCAAAGGTTTTGAGGCAGCTGTTGCTGCTGGAGCTAAGGAAGTGGCTATTTTTCCTGCAGCTTCTGAATCATTCTCTAAAGCAAATCTCAATTGTGGAATTGAGGATAACCTCACTCGTTGCCGTGATATTGCTTCAGCTTCTAGAAGCCTTGCAATCCCAGTTCGTGGATACGTATCATGTGTTGTGGGATGTCCTCTGGAAGGAAAAATTGCTCCAGCAAAAGTAGCATATGTTGCAAAATCACTTTATGAGATGGGTTGCTCGGAGATTTCATTAGGGGATACAATTGGTGTTGGTACACCTGCTACTGTCATTTCTATGCTTGAAGCCGTTCTTGATGTTGTTCCGATTGACAAACTTGCTGTCCACTTTCATGATACTTATGGTCAGGCACTTTCAAATACTCTAATTTCACTACAGATGGGGATCAGCACAGTGGATTCATCTGTCTCTGGTCTTGGAGGTTGTCCATATGCTAAGGGTGCAACTGGGAATGTTGCCACTGAGGATGTTGTTTATATGCTGAATGGACTTGGAGTTCAAACCAATGTGGACCTTGGAAAACTTATGCTTGCTGGGGATTTCATCTGCAACCATTTAGGACGTGCATCTGGTTCGAAAGCTGCAACTGCCTTGAATAAAGTTACAAATAATGCCTCCAAAGTGTGA 1290 0.4116 MYKIVQRLRFSNRAPLLTHSHFEQSQFVSDFSSHATFDTDPTISSYATTDRVRRVESLDFREITNRRELTNAFDKYNINILSGWLNWTSRANDNHHGANYVVNRHFKTDRKDRCTKEFSRKFLENVPDFVKIVEVGPRDGLQNEKVIVPTDVKIELIKLLVSSGLSVVEATSFVSPKWVPQLADAKDVLAAIRNVEGASFPVLTPNLKGFEAAVAAGAKEVAIFPAASESFSKANLNCGIEDNLTRCRDIASASRSLAIPVRGYVSCVVGCPLEGKIAPAKVAYVAKSLYEMGCSEISLGDTIGVGTPATVISMLEAVLDVVPIDKLAVHFHDTYGQALSNTLISLQMGISTVDSSVSGLGGCPYAKGATGNVATEDVVYMLNGLGVQTNVDLGKLMLAGDFICNHLGRASGSKAATALNKVTNNASKV 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02018 429 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 52 428 - -
Car03g02018 429 Pfam HMGL-like 130 402 IPR000891 GO:0003824
Car03g02018 429 CDD DRE_TIM_HMGL 132 404 - -
Car03g02018 429 ProSiteProfiles Pyruvate carboxyltransferase domain. 130 397 IPR000891 GO:0003824
Car03g02018 429 Gene3D Aldolase class I 123 422 IPR013785 -
Car03g02018 429 PANTHER HYDROXYMETHYLGLUTARYL-COA LYASE 52 428 IPR043594 GO:0016833
Car03g02018 429 SUPERFAMILY Aldolase 126 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02018 Car-Chr3 66330418 66335622 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02018 K01640 - gmx:100801507 625.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02018 03 66330418 66335622 Car03g02018 03 66330418 66335622 ECH