Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02005 ATGGATTCAACATCGTGTGTCTCTAACGATGCAGTTTCTGGGTTCAAAGACAAGGAGTCAATGGTTGACCCTTTTTTGGTTGAAGCTCTTCAGAACCCTCGTCATCGTCTTACAATTCTGCGGATGGAGCTGGATATCCAGAAATTTCTGAATAATGGCGATCAGCAGCATTTCGAGTTTCAACATTTTCCTTCTTCTTATCTCCGACTGGCTGCACATCGTGTCGCTCAACACTATGGTATGCAAACAATGGTTCAAGATACCGGCTTAGATGGCCAGAGTAAAATCCTGGTCAGAAAGTTAGCTGAAAGCAAGTATCCTGTAGTTCGCTTATCTGAAATACCTGCAAAACAGTTGGACAGTGAGAAATCCGAGCAGAAAAAAATTGTCATTCGACCTAGGCCTCAGAAAAATAGTTTGGATGGATCCAATGAGTCTGCAAAGAAAGGAAACACTCTGAGAAGTGTGGAAGAGAGGAAAGAGGAATATGATCGGGCACGAGCACGTATCTTTAGTGGCTCTACAAGCTTTGATTCAAGTGATACCCCATCCGTGGTCCCTATAGATGGCAGACATTCTTTAATGAACAAGGATGAGAATGAAACTAGCAAAGTCCCCATGTCTGATTCAGAAAGATGCATTAGTATCAGGGATAATAGTTATCCTCGAGTTGCCATTATCAGGGATAGGGAAAAGGATCGAAGTGATCCAGATTATGATCGTAGCTATGGAAGGTATGCTAGGAGTGTTGCAACCTCTGCAGTTAACTTGGTGCCTTTTAATTTGCAAAAAGTTCAACCTTCATTTGCGCCGTATGATGCTACTTTTAATCAGTTGGGTCAGATGTCACAAACTCAAGCTTCACTTGGATATGGACTTCCTTCAACCCCGATAATGAGTCCTTTCTGTACACCAGGATTGAATCCGACATCTGCGGATGGAGCTTACCTACAGTGGCCAAGTCCTACAATGATGTATGCTCATTCGTATGACCAATTTAGACATGCTGTTTACCAGGCTCCATTTGGTCAACCGTTGAGCTTTGACTATTCACAGAACTATTAG 1065 0.4272 MDSTSCVSNDAVSGFKDKESMVDPFLVEALQNPRHRLTILRMELDIQKFLNNGDQQHFEFQHFPSSYLRLAAHRVAQHYGMQTMVQDTGLDGQSKILVRKLAESKYPVVRLSEIPAKQLDSEKSEQKKIVIRPRPQKNSLDGSNESAKKGNTLRSVEERKEEYDRARARIFSGSTSFDSSDTPSVVPIDGRHSLMNKDENETSKVPMSDSERCISIRDNSYPRVAIIRDREKDRSDPDYDRSYGRYARSVATSAVNLVPFNLQKVQPSFAPYDATFNQLGQMSQTQASLGYGLPSTPIMSPFCTPGLNPTSADGAYLQWPSPTMMYAHSYDQFRHAVYQAPFGQPLSFDYSQNY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02005 354 MobiDBLite consensus disorder prediction 122 160 - -
Car03g02005 354 ProSiteProfiles R3H domain profile. 36 102 IPR001374 GO:0003676
Car03g02005 354 SMART R3H_4 20 101 IPR001374 GO:0003676
Car03g02005 354 SUPERFAMILY R3H domain 10 124 IPR036867 GO:0003676
Car03g02005 354 Gene3D - 13 135 IPR036867 GO:0003676
Car03g02005 354 Pfam SUZ domain 125 174 IPR024771 -
Car03g02005 354 PANTHER OS05G0411600 PROTEIN 5 353 - -
Car03g02005 354 CDD R3H_encore_like 35 100 - -
Car03g02005 354 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Car03g02005 354 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 5 353 - -
Car03g02005 354 Pfam R3H domain 38 89 IPR001374 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02005 Car-Chr3 66165303 66169541 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02005 - - gmx:100796710 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02005 03 66165303 66169541 Car03g02005 03 66165303 66169541 ECH