Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01988 ATGAGATTGTTTGAAATGGCTGTGGCCATTGATCAACAACAACACCATGGATTTAAACCATTTAGCCGATCCCAAAGATGCAAACTCCAATCCTTTGGTCATCTTGATTACAACAACATTCTCCAACTCAACCAACAAACTACTTTTTCCCACTCTTTCGAACTAGCATTTCAAGCCGATAATATTCACCGCAGTTTCTCCACTCCATGTCTACCCTTAACCGGGGGAGATGATCTCCATTCTCCTCATCCGAGGATTGAGGTCGTTCGTGGAAGTGGAGCTCCGGTACACACTCTTGTTGTCGAGGTTGCTATTGCTATGGCCTCAGGTATTCAACCTATTCCACTCCCTAATGGACTTGGTGGTGCCTATGTTTTCCATAACCAAAATGGTAACAACATTGCTGTAGCAAAGCCAGTAGATGAAGAACCTTACGCCATTAATAACCCCAAAGGCTTAAATAACAGTCCTCAAATAATGCTAGGCCAACCTGGCTTAAAGCGCTCGATTCGAATAGGTGAAACTGGAATTAGAGAATTAGCTGCTTATCTACTTGATCATGGAGCCTTTGCTGGCGTGCCTCCAACTGCTTTAGTTAAATTCTGTCATGCTACATTTTCTGATACTTCAGCCACAGTTAAACTCGCCTCGCTCCAACGCTTTGTTGGTCACGGTTTCGATGCTGGAGAGTTAGGCCCTTCTTTCTTCTCAGTTGGTTCTGTTCACCAAATCGGTATTCTTGACATTAGACTTTTGAATCTTGACAGACATGCAGGGAATATGCTTGTTATGAAACATGATCAAAAGAGTTATTGTGCTAATGGTGGTGCTGTTGCTGATCTTGTTCCGATTGATCATGGCTTTTGTCTACCTGAGTGGCTGGATGATCCATATTTTGAATGGCTGCATTGGCCACAAGCCTCAATTCCTTTCTCTGAATCAGAACTTGAGTACATTTTAAAACTTGATCCTTTTAAAGATGCTGATATTCTAAGAGCCGAGGTTCCTTCGTTGAGAGAAGCGTCTATTCGTGTTCTTATCGTTTGCACAATTTTCTTGAAACAAGCTGCTGCTGCTGGTCTTTGTCTTGCTGATATAGGCCAGATGATGACAAGGGAGTTTTGTCGCGGTAAGGAATCATCGTCCAGTGAATTGGAAAATATTTGCTTGCAAGTCAAGGCAAGTATCAACAATGAGAGTGAAAAAGAAGAACAGGAGTCTAGTTGTGGAGTTGGTGGCATTTCTTTTGGTGACATGAACAAGGGTGAATGGGAATTGTTTTTGGAGATTTTTGATAAGTTTGTGATTGGAGTTTTTGAGGAAAAGAAGACGTACAAGAGTTGA 1344 0.4204 MRLFEMAVAIDQQQHHGFKPFSRSQRCKLQSFGHLDYNNILQLNQQTTFSHSFELAFQADNIHRSFSTPCLPLTGGDDLHSPHPRIEVVRGSGAPVHTLVVEVAIAMASGIQPIPLPNGLGGAYVFHNQNGNNIAVAKPVDEEPYAINNPKGLNNSPQIMLGQPGLKRSIRIGETGIRELAAYLLDHGAFAGVPPTALVKFCHATFSDTSATVKLASLQRFVGHGFDAGELGPSFFSVGSVHQIGILDIRLLNLDRHAGNMLVMKHDQKSYCANGGAVADLVPIDHGFCLPEWLDDPYFEWLHWPQASIPFSESELEYILKLDPFKDADILRAEVPSLREASIRVLIVCTIFLKQAAAAGLCLADIGQMMTREFCRGKESSSSELENICLQVKASINNESEKEEQESSCGVGGISFGDMNKGEWELFLEIFDKFVIGVFEEKKTYKS 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01988 447 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 409 444 IPR044571 -
Car03g01988 447 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 6 405 IPR044571 -
Car03g01988 447 Pfam Phosphatidylinositol 3- and 4-kinase 120 365 IPR000403 -
Car03g01988 447 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 409 444 - -
Car03g01988 447 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 8 6 405 - -
Car03g01988 447 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 110 404 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01988 Car-Chr3 65959882 65962569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01988 6 394 Acyl Lipid Metabolism Gene Families AT3G56600 61.111 6.73e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01988 - - gmx:100809677 612.453
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01988 03 65959882 65962569 Car03g01988 03 65959882 65962569 ECH