Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01987 ATGGGAAAAGCCGAAGAAGAACTACAACACCTGCCACGTGGCGCCACCTCATCAGATCCACCGCAAAATGCTGAGACAGAGTGTCGGTGTTCACGGATTCGGAAACTCGTTGGTTTCAGATGCATTCTCGTTTTCCTCTTCTCTCTTGCTTTGTTTCTTTCAGCTTTGTTTTGGTTGCCCCCTTTTCTTCGCTTCGCAGATCACAAGAATCTTCACGATGATTCCAAATACAAAGGTCATGATATTGTTGCAAGCTTTATTGTTAATAAGCCAGTCACTGTGTTAAAAGATAACATTTCACAGCTCGCGGGTGAAATTTTTGATGAGATAGAAGCTCCCTCTACTAAAGTGATCATCTTGTCTCTAGACCCGTTACCTAAGCCAAACAAGACAAAAGTGGTGTTTGCAGTTGATCCAGATGGCGAATACTCAGAAATGTCTTCGCCTGCCGTTAGTTTGATAAGATCATTATTTACGTCCTTGGTAATACACCAATCAGTTCTCCAGCTCACTTCATCCTTGTTCGGAGATCCCTACTTTTTTGAGGTGCTGAAATTTAAAGGAGGAATTACTATAATTCCACAACAGAATGCATTTCCTCTGCAGACAGTGCAAACAAAATTCAACTTTTCTTTGAATTTCCCCATTTATCAAATACAATCAAATTTCAATGAGCTGACAAGTCAACTAAAGTCTGGATTACATCTGGCATCCTTCGAGAACTTGCACGTCATCTTATCAAATTCCGAAGGTTCAACTGTAGATGCTCCTACTACTATTCAATCCTCGGTTCTACTTGCGGTTGGGATTCCTCCATCAAAACAGAGGCTAAAGCAATTGGCGCAAACCATCATGGGACCTCATAATCTTGGCTTGAATAACACCGAATTTGGTAGGGTTAAGCATGTCAGACTTTCATCCGTCTTGCAGCATTCTCTGAACGGCAGTGATACTGGCTCTGCAAGATCACCTTCTCCTTCTCCTGTGCCTCATTCCCCGcaccaccaccaccaccaccaccaccaTCATCATCACCATCACAGTGAACATCTCACTCCTGAAACTTCTCCAATACCTGCACCTGCGCCTAAACCCAGGAAGGGTGTAACTCCACCCGAGGTTGGCTCTCCTGCTGCTACAAATAGTGCCCCTGCACCACGGAAAAGTTCACGAGCTCAGCCTCCTGATTGTCCATTTGAGCGTAGGAAAAGGTCTAGGCGTAGTGGTGAGAGACATGCTTATCTAACGCCTGCTGTTGCTCCTAGTACTCAACAACATTCTCCTGTTCCTATTCCATCACCAAAACCACAAGTTGAACCCCCTACCCCTACACATGCCTCTCATTCAGTACCTGCTTTGAGTCCTTTGCCAAATGTAGCTTTTGCTCATGCTGAGCCCCCACCTAAGAATCAAGCGCCTGCAGAATTTCACGGGCTATCATCATCATCATCTTCTGCAGGTTGTATTGGAAGTGTTAAATGGAAACCTTTAATATTTCTTGTACTTGTGTTACATGTACCCACAATATCATATCTTCTGATTGAAAGTAAAGCTATGGTGAATCCGGGCTTGTCTACTGGAAACAAGTTGGTGAATTCAGTGAAGATAAGCTTTCGGTTACCGTATCTTACACAATGGGGTCAGAGCTTATTGGTGTGTGGCTCTGTACCAGTTCTTGGATCCTGGAATGTGAAGAAGGGTGTGTTGCTCAGTCCCTTTCATGAAGGTTCTGAGCTCATTTGGAGTGGAAGCATTACAGTGCCAAAAGGGTTTCAATGCGAGTACACCTATTATGTTGTGGATGATAAGAAAAATGTTGTGAGATGGGAGATGGGGAAGAAGCACGAACTGAGGCTCCCCGAAGGTGTTCAGAGTGGTCAGGAAATCGAGTTTCGTGATCTTTGGCAGACTGGCTCAGATGCTCTCCCTTTCAGAAGTGCTTTCAGAGATGTCATTTTTCGGCAAAGCTGGGATTCGACCATCAAGACAGGAGTCAACCACATCAATGTTGAACCAGAAGCAGAATCCATCCTCGTCCAGTTCAAAGTTTTCTGCCCAAATATTGAGAAAGATACATCAATATACGTGATAGGTAGCAACACAAAGTTGGGACATTGGAAAGTTCAACACGGACTAAAACTAAGCTATTTTGGTGAATTTGTCTGGCTAGCTGAATGTGTGATGCAAAGGACTTTACATTTTTCCTTAACAGCTATTTCCACATATAGATATTGTAAATATGGCAGGTCTGGGAATGCGTCTATCGAAAATGGTCCAAATCGAGAAGTCTCCATCAACTCCTCAAGAAGAGAGGCAAAATATATTTATCTTTCAGACGGCATGATTCGTGAAACACCGTGGCGCGGTGCCGGTGTAGCAATTCCTATGTTCTCTATTAGGTCGGAATCTGATCTAGGTGTTGGCGAGTTTCTTGACCTTAAATTACTAGTTGACTGGGCTGTAGCATCTGGTTTCCATTTAGTTCAACTTTTACCAATCAATGATACATCCGTGCATCGGATGTGGTGGGATTCTTATCCATACAGTTCACTATCAGTATTTGCGCTGCATCCGTTGTACCTGAGAGTACAGGCACTTTCTGAGAACATACCAGAGGAGATCAAGCAAGAGATTGAGAAGGCAAAACAACAATTAGATGGGAAGGATGTTGATTATGAAGCTACAATGGCTACTAAACTCTCAATTGCTAAGAAAGTTTTTGATCAAGAGAAGGATTTAATCCTTAATTCGAGTTCCTTTCATGAGTTCTTTTCTGAGAACGAGGGTTGGTTGAAACCCTATGCTGCATTCTGTTTCCTGCGAGATTTCTTTGAAACATCAGAACGAAGTGAATGGGGCCGTTTTGCTCATTATTCAGAAGATAAGTTAGAGAAACTTGTATCAAAGGAAAGTCTGCATTACGGGATAATTTGCTTCCACTACTATGTTCAATACCATCTACATCTACAATTGTCTGAAGCTTCAGAATATGCGAGAAAGAAAGGAGTGATTCTAAAGGGAGATCTTCCCATTGGAGTTGACAGAAACAGCGTGGATACATGGGTTTATCCAAATTTGTTCCGAATGAACACTTCTACCGGGGCACCTCCTGATTATTTTGATAAAAATGGCCAGAATTGGGGCTTTCCTACTTATAATTGGGAAGAGATGTCGAAAGACAACTATGCTTGGTGGCGAGCTCGATTGACACAGATGGGAAAGTATTTCACAGCTTACAGGATTGATCACATATTGGGATTTTTCCGAATTTGGGAACTTCCAGATCACGCTGTGACTGGTCTAGTCGGAAAATTCCGACCATCTATTCCGCTAAGTCAGGAAGAACTTGAAAGAGAAGGAATATGGGATTTTAATCGCCTGAGCCGCCCATACATTAGGCAGGAAATATTACAGCAAAAATTTGGATTGGCGTGGACGTTTGTTGCAACAACTTTTCTGAATGAATATGAAAAGAACTGCTATGAGTTCAAGGAGGATAGCAACACCGAGAAAAAAATTGTTTCCAAACTGAAAACTTCCGCAGAAAGTTCCCTGTTGTTGGATGGTGAAGACAAAATCCGACGCAGTCTGTTCGATCTTTTACAGAATATAGTTCTAATCCGAGATCCGGAGGATCCAAAAAGTTTTTATCCTCGTTTCAACCTTGAAGATACCTCAAGTTTTCAAGCTTTGGATGATCATAGCAAGAATGTTCTGAAAAGATTATATTACGACTACTATTTCCATCGTCAAGAGACTCTTTGGAGACAAAATGCACTGAAGACTCTACCTGCACTTCTAAATTCATCAGACATGCTGGCCTGCGGGGAAGATTTGGGCCTCATTCCATCTTGCGTGCATCCTGTTATGCAAGAGCTCGGATTAGTGGGGTTGCGCATTCAACGGATGCCCAATGAATCCGATCTGGAATTCGGTATTCCTTCTCAATACAGCTACATGACGGTATGTGCCCCATCATGTCATGACTGTTCCACCTTGCGTGCTTGGTGGGAAGAAGACGATGAAAGAAGACAACGGTTTTTCAAGAATGTGATGGAGTCAAATGAGTTGCCACCTGATCAATGTGTTCCAGAAATTGCACATTTTATTATAAGGCAACATATTGAATCCCCATCAATGTGGGCAATTTTCCCTCTTCAGGACTTGTTAGCATTAAAAGAAGAATATACAGCACGCCCCGCAACGGAAGAGACAATCAACGACCCTACAAATCCGAAGCACTATTGGAGATTCCGTGTGCATGTGACTCTGGAGTCATTGAATGAAGATAATAAGCTCAAAACCATAATCAAAGATCTTGTACGTTGGGGTGGAAGATCAATTCCTTCAGAGGACTCACAAGTTGAATCAAGTCTAATCTCAGCATCATCAGTAGCAGATGATGTCTCCAAGAAGCAACAGTTTGCCGGTACCGGTGAAAAGATCCGTCATCCTTCTGAGTTTAACGGAGTTCCAACAAAGGATCCCTTGGCTGTCCTTTGA 4503 0.4244 MGKAEEELQHLPRGATSSDPPQNAETECRCSRIRKLVGFRCILVFLFSLALFLSALFWLPPFLRFADHKNLHDDSKYKGHDIVASFIVNKPVTVLKDNISQLAGEIFDEIEAPSTKVIILSLDPLPKPNKTKVVFAVDPDGEYSEMSSPAVSLIRSLFTSLVIHQSVLQLTSSLFGDPYFFEVLKFKGGITIIPQQNAFPLQTVQTKFNFSLNFPIYQIQSNFNELTSQLKSGLHLASFENLHVILSNSEGSTVDAPTTIQSSVLLAVGIPPSKQRLKQLAQTIMGPHNLGLNNTEFGRVKHVRLSSVLQHSLNGSDTGSARSPSPSPVPHSPHHHHHHHHHHHHHHSEHLTPETSPIPAPAPKPRKGVTPPEVGSPAATNSAPAPRKSSRAQPPDCPFERRKRSRRSGERHAYLTPAVAPSTQQHSPVPIPSPKPQVEPPTPTHASHSVPALSPLPNVAFAHAEPPPKNQAPAEFHGLSSSSSSAGCIGSVKWKPLIFLVLVLHVPTISYLLIESKAMVNPGLSTGNKLVNSVKISFRLPYLTQWGQSLLVCGSVPVLGSWNVKKGVLLSPFHEGSELIWSGSITVPKGFQCEYTYYVVDDKKNVVRWEMGKKHELRLPEGVQSGQEIEFRDLWQTGSDALPFRSAFRDVIFRQSWDSTIKTGVNHINVEPEAESILVQFKVFCPNIEKDTSIYVIGSNTKLGHWKVQHGLKLSYFGEFVWLAECVMQRTLHFSLTAISTYRYCKYGRSGNASIENGPNREVSINSSRREAKYIYLSDGMIRETPWRGAGVAIPMFSIRSESDLGVGEFLDLKLLVDWAVASGFHLVQLLPINDTSVHRMWWDSYPYSSLSVFALHPLYLRVQALSENIPEEIKQEIEKAKQQLDGKDVDYEATMATKLSIAKKVFDQEKDLILNSSSFHEFFSENEGWLKPYAAFCFLRDFFETSERSEWGRFAHYSEDKLEKLVSKESLHYGIICFHYYVQYHLHLQLSEASEYARKKGVILKGDLPIGVDRNSVDTWVYPNLFRMNTSTGAPPDYFDKNGQNWGFPTYNWEEMSKDNYAWWRARLTQMGKYFTAYRIDHILGFFRIWELPDHAVTGLVGKFRPSIPLSQEELEREGIWDFNRLSRPYIRQEILQQKFGLAWTFVATTFLNEYEKNCYEFKEDSNTEKKIVSKLKTSAESSLLLDGEDKIRRSLFDLLQNIVLIRDPEDPKSFYPRFNLEDTSSFQALDDHSKNVLKRLYYDYYFHRQETLWRQNALKTLPALLNSSDMLACGEDLGLIPSCVHPVMQELGLVGLRIQRMPNESDLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDDERRQRFFKNVMESNELPPDQCVPEIAHFIIRQHIESPSMWAIFPLQDLLALKEEYTARPATEETINDPTNPKHYWRFRVHVTLESLNEDNKLKTIIKDLVRWGGRSIPSEDSQVESSLISASSVADDVSKKQQFAGTGEKIRHPSEFNGVPTKDPLAVL 1500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01987 1500 MobiDBLite consensus disorder prediction 331 348 - -
Car03g01987 1500 MobiDBLite consensus disorder prediction 459 478 - -
Car03g01987 1500 Pfam Starch binding domain 534 626 IPR002044 GO:2001070
Car03g01987 1500 Pfam Starch binding domain 677 772 IPR002044 GO:2001070
Car03g01987 1500 SMART CBM_20_2 676 775 IPR002044 GO:2001070
Car03g01987 1500 SMART CBM_20_2 533 629 IPR002044 GO:2001070
Car03g01987 1500 PANTHER - 530 1447 - -
Car03g01987 1500 CDD CBM20_DPE2_repeat1 535 635 IPR034840 GO:2001070
Car03g01987 1500 MobiDBLite consensus disorder prediction 312 453 - -
Car03g01987 1500 MobiDBLite consensus disorder prediction 427 441 - -
Car03g01987 1500 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 528 637 IPR002044 GO:2001070
Car03g01987 1500 SUPERFAMILY (Trans)glycosidases 787 1440 IPR017853 -
Car03g01987 1500 MobiDBLite consensus disorder prediction 1 24 - -
Car03g01987 1500 MobiDBLite consensus disorder prediction 356 370 - -
Car03g01987 1500 MobiDBLite consensus disorder prediction 1471 1500 - -
Car03g01987 1500 Gene3D Glycosidases 1241 1446 - -
Car03g01987 1500 Pfam 4-alpha-glucanotransferase 794 1422 IPR003385 GO:0004134|GO:0005975
Car03g01987 1500 SUPERFAMILY Starch-binding domain-like 675 769 IPR013784 GO:0030246
Car03g01987 1500 Gene3D Glycosidases 787 1117 - -
Car03g01987 1500 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 671 789 IPR002044 GO:2001070
Car03g01987 1500 SUPERFAMILY Starch-binding domain-like 533 635 IPR013784 GO:0030246
Car03g01987 1500 Gene3D Immunoglobulins 527 637 IPR013783 -
Car03g01987 1500 Gene3D Immunoglobulins 669 777 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01987 Car-Chr3 65940972 65957567 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01987 534 1450 Glycoside Hydrolase AT2G40840 72.004 0.0 1435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01987 K00705 - gmx:100809128 1696.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01987 03 65940972 65957567 Car03g01987 03 65940972 65957567 ECH