Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01979 ATGGCTTCCTTCCCTCCTCCTGGTTCACTCACCCTCTGCGAACTCAACCGCGAACTAATTACTGTCGACGCTCTCTCCGATGATCGAGCCAACCAAACCTACGGAAAGCTTCTCGGATTGGTATTCAGCCCTGTGCCGTTTCAGCCACCACCGCCGCCTCTCGAGAACGACGTTCCCGAACAGGAAGGAACTACAGAAACAACTGTAACCGCTGGTGAAAGCGTTCCGAGAAAAAGTCCTGTGGCACTCGTGCAAGGCCTTGTAAACGAGTGTCTCAGACGACTCTTTTACCCTAACGATGTGCATTTGTTGCCTGAGGTTAACCTTCAAGGAGTTAGTTGGCACCTTAATAAGCATATAATTGCTTTTATATCTGGGCCAAACCAAGTTTTAGTTCGTGATTATGAAGATCCAGATGGGAAGGATTCAATTATTTTGACCAACGAGTCTCAGAGAGATGTTAGAGTACTAGAGTGGAGGCCCAATGGAGGGAGGATGCTTGCTGTGGGTTGCAAGAGCGGGATTTGCTTATGGTCTGCTTCATATCCTGGAAATGCAGCATCTGCTAGATCTGGCACTATTTCCTTTGTAGGAAGTTTATCTAGAGGCTCTGGAATTCGGTATCTCCTGGTCGATTTTCTTCGAAGTCAAAATGATGAACATGTTAGCGCCCTTACATGGAGCCCCGATGGAAGATACTTAGCTTCTGCGTCATATGAGAGCTCTTCATTCACTGTGTGGGATGTTGCTCAAGGTGTGGGAACACCCATTCGACGAGGATTAGGAGGCATATCAATGTTAAAGTGGTCACCCACTGGAGATTACTTCTTTGCTTCAAAATTTGATGGAACATTTTATCTTTGGGAGACAAACACATGGACATCAGAACAATGGTCATCAACTAGTGGTTTTGTCAAGTGTGCAACATGGGATCCAGATGGGCGTATGATACTGCTTGCATTTTCCAAATCATCAACTTTGGGATCTGTTCACTTTGCATCGAAGCCTCCTGCATTAGATGCACATTTGTTACCTGTTGACTTGCCAGAGATATTATCATTGACAGGCAGTCAGGGAATTGAAAAAATAGCATGGGATAATTCAGGAGAGCGATTGGCTGTGTCTTTTAAAGGTGGAGATGATGTATATGGGGGTCTCATTGCCATCTATGATACAAGAAGGTCTCCTCTGATATCTACATCATTAATTGGATTTATAAGAGGGCCTGGAGACAACCCAAAGCCAATATCATTTTCATTCCACGGGAAATTTAAGCAGGGACCATTGCTCTCTGTGTGTTGGAGCAGTGGATTTTGTTGCACTTACCCTCTCTTATTTCGTTCTCATATGCTTTCGTAA 1359 0.4481 MASFPPPGSLTLCELNRELITVDALSDDRANQTYGKLLGLVFSPVPFQPPPPPLENDVPEQEGTTETTVTAGESVPRKSPVALVQGLVNECLRRLFYPNDVHLLPEVNLQGVSWHLNKHIIAFISGPNQVLVRDYEDPDGKDSIILTNESQRDVRVLEWRPNGGRMLAVGCKSGICLWSASYPGNAASARSGTISFVGSLSRGSGIRYLLVDFLRSQNDEHVSALTWSPDGRYLASASYESSSFTVWDVAQGVGTPIRRGLGGISMLKWSPTGDYFFASKFDGTFYLWETNTWTSEQWSSTSGFVKCATWDPDGRMILLAFSKSSTLGSVHFASKPPALDAHLLPVDLPEILSLTGSQGIEKIAWDNSGERLAVSFKGGDDVYGGLIAIYDTRRSPLISTSLIGFIRGPGDNPKPISFSFHGKFKQGPLLSVCWSSGFCCTYPLLFRSHMLS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01979 452 SUPERFAMILY WD40 repeat-like 108 442 IPR036322 GO:0005515
Car03g01979 452 MobiDBLite consensus disorder prediction 49 74 - -
Car03g01979 452 Pfam WD domain, G-beta repeat 220 248 IPR001680 GO:0005515
Car03g01979 452 SMART WD40_4 347 391 IPR001680 GO:0005515
Car03g01979 452 SMART WD40_4 250 289 IPR001680 GO:0005515
Car03g01979 452 SMART WD40_4 207 248 IPR001680 GO:0005515
Car03g01979 452 SMART WD40_4 139 179 IPR001680 GO:0005515
Car03g01979 452 Gene3D - 105 257 IPR015943 GO:0005515
Car03g01979 452 MobiDBLite consensus disorder prediction 60 74 - -
Car03g01979 452 Gene3D - 258 441 IPR015943 GO:0005515
Car03g01979 452 PANTHER ALADIN/ADRACALIN/AAAS 1 451 IPR045139 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01979 K14320 - gmx:100808599 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01979 03 65825690 65831113 Car03g01979 03 65825690 65831113 ECH