Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01975 ATGACTTTTTCAAAAGCTTCTTGCAGTAGTATTCTTAGGCTCTACCTCATTATAGTGTCTTGTATTGCATTTCAATGTAATGCTGATCATAATCACACTTCAACTCTAGTTATAGATGCTTCTGATGGATCTGGAAGGCCAATTCCTAACACCCTTTTTGGAATATTTTTTGAGGAGATCAATCATGCTGGTACTGGGGGATTGTGGGCAGAACTTGTGAATAACAGAGGCTTTGAAGCTGGGGGTACAAAAGTTCCATCAAATATTGACCCTTGGACCATAGTTGGAACAGAATCATCTATTGTAGTACAAACTGAGCTTAATTCTTGCTTTGAACGCAATAAGGTTGCTTTGAGAATTGATGTGCTATGTGACTATTGTTCTTCTGATGGTGTTGGAATCTCTAACCCAGGTTTTTGGGGAATGAACATTGTGGAAGGGAGGAAATACAAGGTAGTGTTGTTTGTTCGTTCAATAGGACCATTAAATATGAAAGTATCATTCAGAAAAGCAGCAGGTGGACAGATATTGGCTTCTAGTAATATCAAAGGTTCTGCATTAGAGGTTTCAAAGTGGAAAAGGATGGAGACTACATTAGTAGCCCATGCATCAAGTTCTAATTCAGTTCTTACCTTAACAACAACTCAAAAAGGGAAGATATGGTTGGACCAAATATCTGCTATGCCTCTTGACACATTTAAGGGACATGGTTTCCGAAGTGACTTGGTTGACATGATAGTACAGTTGAAACCAGCCTTTCTCAGATTTCCAGGTGGTTGCTTTATTGAAGGACACAGATTAAAAAATGCATTTAGGTGGAAAGATAGTGTTGGACCCTGGGAACAAAGACCTGGACACTTTGGTGATGTTTGGAATTACTGGACAGATAATGGATTTGGTTATTTTGAGGGTCTTCAACTAGCAGAGGACATTGGTGCAAGGCCAGTGTGGGTCTTCAACAACGGCATAAGCCATACTGATGAAGTTGATACAAGGGTCATCGCACCTTTTGTGCAAGAAGCACTTGATGGGATTGAGTTTGCTAGAGGTACATCTACTTCAAAATGGGGTTCCCTTAGAGCATCTATGGGACACCCACAACCTTTTGACCTAAAATATGTTGGTGTTGGAAATGAAGATTGTGAGAAGCTAAATTACCATGGAAATTACCTAGCCTTCTACTATGCAATACGACAAGCTTATCCAGATATTCAAATTATTTCAAATTGTGATGCTTCTGTCAGGCCGTTAGCTCACCCAGCTGATTTGTATGATTATCATACTTATCCTAATGACGCTCGACATATGTTTAGTAACGCTCATGTTTTTGATAAGACACCACGCCATGGACCAAAGGCTTTTGTGAGTGAGTATGCTTTAGTTGGAGACAACCAAGCTAGGCATGGAACCCTTTTGGGAGCTGTCTCTGAAGCTGGATTCCTTATTGGATTAGAAACAAACAGTGATCATGTTGTAATGGCTAGCTATGCTCCACTTTTTGTAAATGCAAATGACAGAAAGTGGAACCCAGATGCAATTGTTTTTAACTCCAATGGAGCTTATGGAACTCCTAGCTATTGGGTGCAATACATGTTCAGAGAGTCAAATGGAGCAACATTTCTCAACTCACAACTTCAAACAACTGATCCTAACTCAGTGGTTGCATCTGCAATTCTTCTGCAAAATCCTCAAAATAAAAAAACTTACTTAAAAATAAAGATTGCAAACATAGGAAACAACCAAGTGAATCTCAAGATTTCTATTAAGGGATTTGGGAGCTCAAATCCATCTGAATCAACAAAGACTATTCTCACATCTGAACATGCATTGGATGAGAATAGCTTCTCAAACCCAAAAAAGATAACACCACAACAAAGTCAACTTCAGAGTTCTGGCAATGAGATGAATGTCATAATCCCTCCAATTTCATTAACAGTACTTGATATGTTTAGATAA 1956 0.3891 MTFSKASCSSILRLYLIIVSCIAFQCNADHNHTSTLVIDASDGSGRPIPNTLFGIFFEEINHAGTGGLWAELVNNRGFEAGGTKVPSNIDPWTIVGTESSIVVQTELNSCFERNKVALRIDVLCDYCSSDGVGISNPGFWGMNIVEGRKYKVVLFVRSIGPLNMKVSFRKAAGGQILASSNIKGSALEVSKWKRMETTLVAHASSSNSVLTLTTTQKGKIWLDQISAMPLDTFKGHGFRSDLVDMIVQLKPAFLRFPGGCFIEGHRLKNAFRWKDSVGPWEQRPGHFGDVWNYWTDNGFGYFEGLQLAEDIGARPVWVFNNGISHTDEVDTRVIAPFVQEALDGIEFARGTSTSKWGSLRASMGHPQPFDLKYVGVGNEDCEKLNYHGNYLAFYYAIRQAYPDIQIISNCDASVRPLAHPADLYDYHTYPNDARHMFSNAHVFDKTPRHGPKAFVSEYALVGDNQARHGTLLGAVSEAGFLIGLETNSDHVVMASYAPLFVNANDRKWNPDAIVFNSNGAYGTPSYWVQYMFRESNGATFLNSQLQTTDPNSVVASAILLQNPQNKKTYLKIKIANIGNNQVNLKISIKGFGSSNPSESTKTILTSEHALDENSFSNPKKITPQQSQLQSSGNEMNVIIPPISLTVLDMFR 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01975 651 Gene3D Glycosidases 213 532 - -
Car03g01975 651 SMART alpha_l_af_c 456 643 IPR010720 GO:0046373|GO:0046556
Car03g01975 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE-LIKE PROTEIN 1 650 - -
Car03g01975 651 SUPERFAMILY (Trans)glycosidases 207 540 IPR017853 -
Car03g01975 651 Pfam Alpha-L-arabinofuranosidase C-terminal domain 457 643 IPR010720 GO:0046373|GO:0046556
Car03g01975 651 Gene3D - 533 649 IPR013780 -
Car03g01975 651 SUPERFAMILY Glycosyl hydrolase domain 522 648 - -
Car03g01975 651 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 650 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01975 Car-Chr3 65799817 65806076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01975 10 651 Glycoside Hydrolase AT3G10740 59.663 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01975 K01209 - gmx:100780771 1038.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01975 03 65799817 65806076 Car03g01975 03 65799817 65806076 ECH