Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01974 ATGGGTTTATCCAAAGCTTCATGCAATGTTTTTCTGCTTCAACTGTTCATAGTGGTTTGTCTTGTGTTCCAATGTTTTGATGTCAAAGTGCATGCTGATCTGAATGCAACACTGACTGTAGATGCTTCCGGGGCGTCTGGAAGGCAAATACCGGAGACTCTTTTCGGAATCTTTTTCGAGGAGATCAATCACGCCGGAGCTGGAGGGTTGTGGGCTGAGCTTGTGAGCAACAGAGGATTTGAAGCAGGGGGCCCTAACATTCCTTCGAATATCGATCCTTGGTCAATTATTGGAAGCGAAACATCTATTAACGTTGAAACTGATCGTACATCTTGCTTTGAACGTAATAAGGTAGCACTTCGATTGGAGGTGTTATGTGACAGTACAGGCAACAACATTTGCCCTGCTGATGGTGTTGGCGTTTATAACCCTGGTTTCTGGGGCATGAATATTGAGCAAGGGAAGAAATACAAAGTTGTCTTCTATGCTCGTTCGACAGGACCACTTAATCTAAGCGTTTCGTTCACTGGATCTAACAGTGTGGGAAACTTGGCTTCAACTATGATCAAAGGTTCTGCATCTGATTTTTCAAACTGGACGAAGGTGGAGGCTTTATTGGTGGCCAAGGCAACAAATCCAAATTCAAGACTTCAATTAACGACAACCACAAAGGGTGTGATATGGCTGGACCAAGTGTCTGCTATGCCACTTGACACATATAAGGGACACGGTTTCCGAAGTGATCTCTTTCAAATGTTGGTAGATATGAAACCAAGTTTCATCAGATTTCCAGGTGGTTGTTTTGTCGAAGGAGATTGGTTAATGAATGCATTTCGATGGAAAGCGGCCGTTGGACCTTGGGAGGAGAGACCAGGGCACTTTGGTGATGTATGGAAGTACTGGACTGATGATGGACTTGGCTATTTTGAGTTTCTTCAACTAGCAGAGGATTTGGATGCTTTACCAATTTGGGTATTTAATAACGGTGTCAGCCATAATGATGAAGTTGACACAACCGCCGTCTTACCTTTTGTGCAAGAAGCTCTTGATGGAATTGAGTTTGCTAGAGGTGACCAGACTTCAAAATGGGGTTCCATTAGAGCTTCTATGGGACATCCGGAGCCATTTAACCTGAAATATGTCGCTGTTGGAAATGAGGATTGCGGAAAAAAGAACTACCGTGGAAACTACTTGAAATTCTATGGTGCGATAAGACGTGCTTATCCAGATATCGAAATTATCTCAAACTGTGATGGTTCTTCAACGCCTTTAGATCACCCTGCTGATATGTATGATTATCATATTTATACAAGTGCAAATGACATGTTTTCTAGGGCTACAACATTTAACCGAGTAACACGAAGTGGTCCAAAGGCATTTGTAAGTGAGTATGCGGTGACTGGAAAGGATGCTGGGCAAGGAAGTCTTTTGGCAGCCCTAGCTGAAGCCGCGTTCCTTATTGGACTGGAAAAGAACAGTGATGTTGTCAAAATGGCTAGCTATGCTCCACTTTTTGTAAATGCCAATGATAGGAGGTGGAACCCCGATTCAATTGTATTCAACTCTTTTCAGCTCTATGGAACTCCTAGCTACTGGATGCAGTTATTTTTCTCAGAGTCAAATGGAGCAACACTTCTGAATTCATCACTTCAAGCAACCGCTTCAAATTCATTAATTGCATCAGCAATTACTTGGCAAAGCTCTGTCGATAAGAAAAATTACATACGGATAAAGGCTGTGAACTTCGGTGCCACCGCGGTGAACCTCAAGATTTCTTTGAATGGATTGGATCCAAATTCATTGCAATCATCTGGGTCAACAAAGAGTGTGCTTACATCTACAAATGTAATGGATGAGAATTCTTTCTCACAGCCAAAGAAGGTGGTTCCAATCCAGAGTCTAGTTCAAAGTGTTGGGAAGGACATGAATGTGATAGTGGCACCCCATTCATTCACATTACTTGATTTGTTGAAAGAATCAAGTAATCTGAAGATGCCAGGGAGTGATTCTTCCACATGGTCTTCTATTTAA 2031 0.4239 MGLSKASCNVFLLQLFIVVCLVFQCFDVKVHADLNATLTVDASGASGRQIPETLFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNIPSNIDPWSIIGSETSINVETDRTSCFERNKVALRLEVLCDSTGNNICPADGVGVYNPGFWGMNIEQGKKYKVVFYARSTGPLNLSVSFTGSNSVGNLASTMIKGSASDFSNWTKVEALLVAKATNPNSRLQLTTTTKGVIWLDQVSAMPLDTYKGHGFRSDLFQMLVDMKPSFIRFPGGCFVEGDWLMNAFRWKAAVGPWEERPGHFGDVWKYWTDDGLGYFEFLQLAEDLDALPIWVFNNGVSHNDEVDTTAVLPFVQEALDGIEFARGDQTSKWGSIRASMGHPEPFNLKYVAVGNEDCGKKNYRGNYLKFYGAIRRAYPDIEIISNCDGSSTPLDHPADMYDYHIYTSANDMFSRATTFNRVTRSGPKAFVSEYAVTGKDAGQGSLLAALAEAAFLIGLEKNSDVVKMASYAPLFVNANDRRWNPDSIVFNSFQLYGTPSYWMQLFFSESNGATLLNSSLQATASNSLIASAITWQSSVDKKNYIRIKAVNFGATAVNLKISLNGLDPNSLQSSGSTKSVLTSTNVMDENSFSQPKKVVPIQSLVQSVGKDMNVIVAPHSFTLLDLLKESSNLKMPGSDSSTWSSI 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01974 676 SUPERFAMILY Galactose-binding domain-like 73 233 IPR008979 -
Car03g01974 676 SMART alpha_l_af_c 462 650 IPR010720 GO:0046373|GO:0046556
Car03g01974 676 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 4 667 - -
Car03g01974 676 Gene3D Glycosidases 219 538 - -
Car03g01974 676 Gene3D - 539 656 IPR013780 -
Car03g01974 676 SUPERFAMILY (Trans)glycosidases 214 545 IPR017853 -
Car03g01974 676 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1-LIKE 4 667 - -
Car03g01974 676 Pfam Alpha-L-arabinofuranosidase C-terminal domain 463 650 IPR010720 GO:0046373|GO:0046556
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01974 Car-Chr3 65792119 65799092 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01974 9 672 Glycoside Hydrolase AT3G10740 70.465 0.0 992
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01974 K01209 - gmx:100787207 1175.61