Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01942 ATGGAAAGAGATCTAAAACAGAAACTACTGACAAAATCACaagaaaatgaagaagaagaagaGCCACTTGGAAAAAGGGTGTGGAATGAAACAAAGCTTATGTGGATAGTTGCAGCACCAGCTATTTTCACAAGATTCTCAACTTTTGGTATTCAAGTTATTAGTCAAGCTTTTGTTGGTCATATTGGTTCTAGAGAACTCGCTGCTTTTGCTCTTGTTTTCACTGTTCTCATTAGATTCGCCAATGGTATTCTGTTGGGAATGGCAACTGCATTGTCAACACTATGTGGACAAGCATATGGTGCAAAAGAATATAGCATGATGGGAGTTTATCTTCAAAGATCATGGATAGTTTTATTCGTAACAGCACTCACTCTTCTTCCTGTTTTCATCTTCACAACCCCAATTTTGACTCTCTTAGGCCAAGATGAAAGCATAGCACAAGTAGCAGGAACAATTTCTCTTTGGTCAATTCCAGTTATGTTTGCTTTCATTGTCTCATTCACTTGCCAGACATTCCTTCAATCACAAAGCAAGAATACCATCATTGCATTCTTGGCAGCTTTTTCCATTATCCTTCATGCATTCCTCTCTTGGCTTTTGACAACGAAATACAAATTTGGGATTGCTGGTGCAATGATTTCAACTTGTTTGGCTTACTGGATTCCAAACATTGGTCAACTTATATTTGTTACATGTGGTTGGTGCCCTCAAACTTGGAATGGTTTCTCATTTTTAGCATTCAAAGACCTTTGGCCTGTTGTCAAACTTTCCCTTTCAGCTGGTGCCATGTTGTGTCTTGAGCTGTGGTACAACACAATATTGGTTCTTTTGACAGGGAACATGAAAAATGCAGAGGTTGAAATTGATGCACTATCTATATGTCTCAACATCAATGGATGGGAAATGATGATATCACTTGGTTTCATGGCTGCAGCAAGCGTTCGAGTATCGAATGAGCTTGGTAAAGGAAGCGCGAAAGCTGCAAAGTTCTCGATCGTTGTGACAGTCCTTACATCATTGGCCATTGGATCCTTTCTGTTTCTGTTTTTCTTATTCTTTAGGGAACGACTTGCTTATATATTTACCTCAAATAAAGAGGTGGCCGCAGCTGTCGGAGATTTATCGCCTTTGTTATCAATCTCTATACTACTAAACAGTGTTCAACCAGTACTCTCAGGAGTTGCTATTGGAGCTGGTTGGCAAAGCATTGTAGCATATGTGAACATAGGTTGTTATTACATCATAGGTATTCCTGTTGGGATTGTGCTTGGTAATGTTATTCATTGGCAAGTCAAGGGAATTTGGATGGCTATAGTGCTAACTATAATTACCTACAAAACTAATTGGGATGAACAGGTGAATGTAGCTCGTAATCGCATAAACAAGTGGTCCAAGGTGGAGAGTACTGATCAAGAAAGAAAAACAAAATTAATTGGAACATAG 1446 0.3845 MERDLKQKLLTKSQENEEEEEPLGKRVWNETKLMWIVAAPAIFTRFSTFGIQVISQAFVGHIGSRELAAFALVFTVLIRFANGILLGMATALSTLCGQAYGAKEYSMMGVYLQRSWIVLFVTALTLLPVFIFTTPILTLLGQDESIAQVAGTISLWSIPVMFAFIVSFTCQTFLQSQSKNTIIAFLAAFSIILHAFLSWLLTTKYKFGIAGAMISTCLAYWIPNIGQLIFVTCGWCPQTWNGFSFLAFKDLWPVVKLSLSAGAMLCLELWYNTILVLLTGNMKNAEVEIDALSICLNINGWEMMISLGFMAAASVRVSNELGKGSAKAAKFSIVVTVLTSLAIGSFLFLFFLFFRERLAYIFTSNKEVAAAVGDLSPLLSISILLNSVQPVLSGVAIGAGWQSIVAYVNIGCYYIIGIPVGIVLGNVIHWQVKGIWMAIVLTIITYKTNWDEQVNVARNRINKWSKVESTDQERKTKLIGT 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01942 481 TIGRFAM matE: MATE efflux family protein 40 436 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car03g01942 481 MobiDBLite consensus disorder prediction 1 22 - -
Car03g01942 481 PANTHER PROTEIN DETOXIFICATION 12 466 - -
Car03g01942 481 PANTHER MULTIDRUG RESISTANCE PROTEIN 12 466 - -
Car03g01942 481 Pfam MatE 40 200 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car03g01942 481 Pfam MatE 263 422 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Car03g01942 481 CDD MATE_eukaryotic 30 454 IPR045069 GO:0042910|GO:1990961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01942 Car-Chr3 65455558 65459662 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01942 K03327 - gmx:100792122 792.341