Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01936 ATGGAGCTATCATCTTCATGCTTATCATCTCCTACAACTCTTCCTCGTTCGCGTCCTTTCACTACTCAATTCCACCCTACCATTAAATCCTACCTCCGTTTCCGGCGAAACCTTGCCACCACCGCCACTCTATCCACTGCAGCTTCCACTCCCTCACTCTACTCTGCCACCCGACAAGGACTTGACGCCGTTAACATTGCCGAAGATGTCACTCAGTTGATTGGTAATACACCTATGGTATATCTGAATAAAGTTACAGAAGGATGTGTAGCAACCGTTGCTGCAAAACTTGAGTCCATGGAGCCTTGCCGAAGTGTCAAGGACAGAATTGGCTATAGCATGTTATCTGATGCCGAAGAGAATGGAGCAATTTCTCCGGGGAAGACTGTTTTAGTTGAACCAACAACTGGAAATACAGGACTTGGCCTTGCGTTTGTTGCAGCAACTAAGGGGTATAGATTGATAGTCACTATGCCTGCTTCTGTTAATATTGAGAGAAGAATCCTTTTACGCGCATTTGGTGCAGAGGTTGTTTTGACTAATGCAGAGAAGGGGCTGAAAGGGGCTGTTGACAAAGCTGAAGAAATTGTCTACGCCACACCCAATGCTTACATGTTCGGACAGTTTGATAACAGGAATAATACAAAGATCCACTTCGAAACTACAGGGCCAGAGATATGGGAGGATACCATGGGTAATGTTGATGCATTGGTTGCTGCTATTGGAACTGGCGGCACTGTTACAGGCACTGGACGTTATCTGAAAATCATGAACAAAAAAATAAAGGTGGTTGGGGTGGAACCTGCAGACAGAAGTATAATCTCAGGAGACAATCCAGgtttcataccaagcaTTTTGGATGTCAAACTGCTTGATGAAGTCGTCAAGGTTACCAATGTTGAAGCTATTGAAATGGCTAGGAGATTAGCACTAGAAGAAGGATTACTGGTTGGGATTTCATCTGGAGCTGCAGCAGCTGCTGCCATAACTTTAGCAAGACGACCCGAAAACTCTGGAAAACTTATAGCGGTTATTTTTCCTAGTTCTGGTGAGAGGTATATTTCCACTGCCCTCTTCAATTCTATCTATGAAGAGGTTCAGAGAATGTAA 1110 0.4378 MELSSSCLSSPTTLPRSRPFTTQFHPTIKSYLRFRRNLATTATLSTAASTPSLYSATRQGLDAVNIAEDVTQLIGNTPMVYLNKVTEGCVATVAAKLESMEPCRSVKDRIGYSMLSDAEENGAISPGKTVLVEPTTGNTGLGLAFVAATKGYRLIVTMPASVNIERRILLRAFGAEVVLTNAEKGLKGAVDKAEEIVYATPNAYMFGQFDNRNNTKIHFETTGPEIWEDTMGNVDALVAAIGTGGTVTGTGRYLKIMNKKIKVVGVEPADRSIISGDNPGFIPSILDVKLLDEVVKVTNVEAIEMARRLALEEGLLVGISSGAAAAAAITLARRPENSGKLIAVIFPSSGERYISTALFNSIYEEVQRM 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01936 369 TIGRFAM cysK: cysteine synthase A 71 359 IPR005859 GO:0004124|GO:0006535
Car03g01936 369 TIGRFAM cysKM: cysteine synthase 71 359 IPR005856 GO:0004124|GO:0006535
Car03g01936 369 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 96 114 IPR001216 GO:0006535
Car03g01936 369 CDD CBS_like 75 355 - -
Car03g01936 369 Pfam Pyridoxal-phosphate dependent enzyme 70 346 IPR001926 -
Car03g01936 369 PANTHER S-SULFO-L-CYSTEINE SYNTHASE (O-ACETYL-L-SERINE-DEPENDENT), CHLOROPLASTIC 46 369 - -
Car03g01936 369 Gene3D - 108 210 IPR036052 -
Car03g01936 369 MobiDBLite consensus disorder prediction 1 21 - -
Car03g01936 369 PANTHER CYSTATHIONINE BETA-SYNTHASE 46 369 - -
Car03g01936 369 Gene3D - 72 355 IPR036052 -
Car03g01936 369 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 66 362 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01936 Car-Chr3 65408591 65413316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01936 62 369 Miscellaneous Gene Families AT3G03630 80.195 5.50e-170 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01936 K22846 - gmx:100819100 539.265