Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01933 ATGAGCGGCGCCGCTCCAAGGTTCCTCTTCATCCTCCGCCGCCACAACATCCGTCTCCTCTCTCCTTCCTTCTCCTCCCATTTCCACCAGCGCGCTCTCTTATCTTTCACTTCCTTTTCCTCACCCACTCCTTCTCCTTCCTCTCTTACACCCAAACTCAAAGTCAAAGCCTCCCAACACCAACAACAACATCATATTCACGCGCAAACTTCAACCTCCTCTCTCGCTGGGTCCCACCCCTGGCCCGAGTTTTCCAGATTTCTCTCCCACATCACATCCGCCGGTTACACTTCCACGATTCCTCCCGCCGATGGTTTCCCTGCCTCTGGAGAATTGTCGCAGGCCGAGGTCAGTGCCTGCTTGGCCTTCGCTCGTGATAGACCCAACCTTCTCAGGTTGCTTTCTATGAGAGACGTTGCGGTTTTGGTTGAACACGGTACTCCCTTTATGTTCCCAGACTCTGAGGATTGCGTTAGGAAGATGAAGTCTTTTGTATCAAACGGCGACTCCACTGCCTTGGATTCTGATAAAGCAAATATGGTTGATCTGATGAAATTTATGCTGAGTTATGCAAGTAACTGCTTGGTTTCTTCAGAAAGGAACATTCTCTATAACAGAAATCTTGTTGAATCAGTAGTCAGAAACCTATTCAGTGATCTTTTCAAGCTGAGTTATAGTGCACCTGGACCTAACTCTTTTGATTCAGTGCAAAGTCAAATACCCGGTAGATTTGGACGCACAATGCCTCCTGGACAAAACATTGAAATGAAAAGGGGTGATTGGATTTGTCCAAGTAGGTGTAGTTTTATGAATTTTGCCAAAAATATTAAATGTCTTGAATGTGAAGAAGCAAGGCCAAAAAGACAACTGACTGGAGGAGAATGGGAATGTCCTCAGTGTGATTTCCATAATTATGGGAGGAATGTAACTTGCTTAAGGTGTGATTGCAAGCGGCCCGGCCAAATATCTTTAGATTCCACCAATACCACGTCACATCCAGTGTATGGAAATGGAAACAGTTCTAATGCTTCAGATATTGATGCTAGATTAGCTGCTAATGAAGAAAAGGCACAACGTTGGTTTAGCAAGGTTTCTCAACTAGACAGCAATTCTGATATTAACAGTGTGATAGACGATGAAGATTTTCCAGAAATAATGCCGTTAAGAAAAGGAGTTAATCGATTTGTTGTGAGCACGAGGAAAACTCCATTGGAGAGGAGGTTGACCAATGCTCAATACAAGAGAAACTTGGGAAATAATGACACTCATGGAGTTGAGGATTTTGAAACCAGGGAGTCGGCCAAGTCCCGTGATACTCTGGATGACATTCTGGGTCGTTCAACTGGTCTTCCTCAATCTGATTATAAAAACATGAGTGCTGAACAAAATTTCAATGGAGGGAGGGCACCTTCAATTGCTAGCAATTCTTCACATTTCAACGACGTTAAAGGGAGCAACACTACTACTCTTCCTTCCTTTCCATCATATGCCAGTTCTCGTGACAATGACAGTACACAACTTTCTAATAACTCTACAAGTGAAAATGTCATCAAGGATAAGGAGAAAGAGCAAGCCGAAAAATCCGATAGATGGTTTAGAAAGATTGCGGAGCTGCATGATGTTCCAGATATAACAAGTGCAATATCTGATGACGATTTCCCTGAAATAATGCCAATGCGTAAAGGAGAAAATCGATTTGTTCTTAGCAAGAAAAAAGATCGGTCCTTGACAACACCAGCATATAAGAGACGTCAGGCCATGGAGCAATCTGGTAATACCAACTTTGTCCCCTTTGTACCCTTCCCCCCAGATTACTTTGCCAAAAAGGACAAGCAACCGGCAGATGAAACCGATTCAATGGATAGGTCCAATGTTGAATCATCCTCAATATCTGAAGCAGCTGAAATGTCAGGCGATGCTAGAGCTAGACTTGTACAGAGTTCAAAACCTTCTGATCAGAGCTCAAGTAACAATCATGTTGGTTCTACTTCTGGAGCTACAAGCAGTGGAAATTCAAGCCAGGGTTTCAATCAAGATCGTGTGCCAAATTTGACAGAGAGTTCATCCACATGCTCAGCGTCCGAGAACCAGAGTGTTGGAACAGAATGGAGAGGAAAGAGTTTAGAGGGGTCGGCAGTCAAGGAACCAGATCCTTTGGACATGTCAGAGGAGGCGAAGGCAGAGAGGTGGTTCCGACGCGTTGCGCAGATTAAGGATATCTCTGAGCTCAGTCAGATTCCAGACGAAGATTTTCCGTCAATAATGCCTATGCGTAAAGGGGTGAACAGATTTGTGGTGAGCAAGCGGAAAACACCATTAGAAAGGAGATTGACATCTCAGCAGTACCGAAGAAATCTTCCTGTTGTGAGCTCAGATCCTGTTAAGAGAGAAAATGAAGAAGAAACGGCGCAAAACAAAAAGAAACAACAACTACCATTGGTTAGGTACCTTGATGGGCGCATTGAAGGGGTGGCATCCCCTTGTTGTTGCTCTAAAGGAGATACACagaagaagaagaagaagaagaagaagTTGATGAATGATGAAGATGATGGTCTTTCAGATAGTTTGTATCAGAGGAAGAGCTTTTTTAGAGAAATGGGTTTGCTTCAATTTGGGAGAAAAAGGGAAGATTCCAATGGAAAATGTGGTGGTAGGAAAGTGAATAGTTGGTCTGATTGTGGGTGTGAGTCTTGTCTTTCATGGGTGAATGTGAATGGTGGTGACTATAAACTTCATTTTGTTGTTAAAGAACCTTTAATGGCAAGTGGTGAAAACTGCAAAGGAGACACTTATGAGAATGTGATATTCTTGCATGGATTTATGTGTTCTTCATCATTTTGGACTCAGACAGTGTTTCCATGTTTCTCTGAAAATGTAAATCATAACTACAGATTGATTGCCATAGACTTGTTGGGATTTGGAAAGAGTCCAAAGCCAAGAGATTGTTTGTACACATTGAAGGATCATGTGGAAATGATTGAGAAATCTGTGGTTCAAACATTGCAGTTAGGTACTTTTCATCTTGTTGCACACTCTATGGGTTGTGTAATTGCATTGGCTTTGGCTGCAAAGTACTCCAAGTGTGTAAAATCAATCACCCTTGTTGCACCTCCATACTCTTCTTCTGAGGAAAAGGATGCTTGTTTAAATGCACTTGAAAAGTTTGCTGGAAAGAAATTGTGGCCAATGTTATCAGCTGGTTCTTCATTTATGTCATGGTATGAGCATTTGGGTCGAACTATTTGCCTTATCTATTGCAGAAATCACAGAATATGGGAAAAGATTCTAAAATTCATTACTCGCAAGAGGGATCTTCATTTCTTTATCACTGACATGACTAGACATACACATCAATCTGCTTGGAGTTCCATGCATAATGTAATATGTGGGGGAGCAAAATTCATTGATAGTTACTTGAAAATTTTGACAAAAAGTGGAGTTAAAATAAATGTTATACAAGGTGATAGAGATCAAATTCTCCCAATGGAGTGCATTAGTAACTTCAAGTTGAAGGCTCCAAAGGCTGAAATTAACATAATTTCAAATGCAGACCATAGCACTGTGCTATTAGGCAGAGAAAATAAATTTGCACATAGTTTGGAGCATACATGGGCATTTTGTAGTTGA 3630 0.4165 MSGAAPRFLFILRRHNIRLLSPSFSSHFHQRALLSFTSFSSPTPSPSSLTPKLKVKASQHQQQHHIHAQTSTSSLAGSHPWPEFSRFLSHITSAGYTSTIPPADGFPASGELSQAEVSACLAFARDRPNLLRLLSMRDVAVLVEHGTPFMFPDSEDCVRKMKSFVSNGDSTALDSDKANMVDLMKFMLSYASNCLVSSERNILYNRNLVESVVRNLFSDLFKLSYSAPGPNSFDSVQSQIPGRFGRTMPPGQNIEMKRGDWICPSRCSFMNFAKNIKCLECEEARPKRQLTGGEWECPQCDFHNYGRNVTCLRCDCKRPGQISLDSTNTTSHPVYGNGNSSNASDIDARLAANEEKAQRWFSKVSQLDSNSDINSVIDDEDFPEIMPLRKGVNRFVVSTRKTPLERRLTNAQYKRNLGNNDTHGVEDFETRESAKSRDTLDDILGRSTGLPQSDYKNMSAEQNFNGGRAPSIASNSSHFNDVKGSNTTTLPSFPSYASSRDNDSTQLSNNSTSENVIKDKEKEQAEKSDRWFRKIAELHDVPDITSAISDDDFPEIMPMRKGENRFVLSKKKDRSLTTPAYKRRQAMEQSGNTNFVPFVPFPPDYFAKKDKQPADETDSMDRSNVESSSISEAAEMSGDARARLVQSSKPSDQSSSNNHVGSTSGATSSGNSSQGFNQDRVPNLTESSSTCSASENQSVGTEWRGKSLEGSAVKEPDPLDMSEEAKAERWFRRVAQIKDISELSQIPDEDFPSIMPMRKGVNRFVVSKRKTPLERRLTSQQYRRNLPVVSSDPVKRENEEETAQNKKKQQLPLVRYLDGRIEGVASPCCCSKGDTQKKKKKKKKLMNDEDDGLSDSLYQRKSFFREMGLLQFGRKREDSNGKCGGRKVNSWSDCGCESCLSWVNVNGGDYKLHFVVKEPLMASGENCKGDTYENVIFLHGFMCSSSFWTQTVFPCFSENVNHNYRLIAIDLLGFGKSPKPRDCLYTLKDHVEMIEKSVVQTLQLGTFHLVAHSMGCVIALALAAKYSKCVKSITLVAPPYSSSEEKDACLNALEKFAGKKLWPMLSAGSSFMSWYEHLGRTICLIYCRNHRIWEKILKFITRKRDLHFFITDMTRHTHQSAWSSMHNVICGGAKFIDSYLKILTKSGVKINVIQGDRDQILPMECISNFKLKAPKAEINIISNADHSTVLLGRENKFAHSLEHTWAFCS 1209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01933 1209 MobiDBLite consensus disorder prediction 788 809 - -
Car03g01933 1209 Pfam alpha/beta hydrolase fold 935 1046 IPR000073 -
Car03g01933 1209 Pfam Zn-finger in Ran binding protein and others 258 286 IPR001876 -
Car03g01933 1209 Pfam Zn-finger in Ran binding protein and others 293 319 IPR001876 -
Car03g01933 1209 SMART zf_4 293 317 IPR001876 -
Car03g01933 1209 SMART zf_4 259 284 IPR001876 -
Car03g01933 1209 MobiDBLite consensus disorder prediction 420 442 - -
Car03g01933 1209 MobiDBLite consensus disorder prediction 608 622 - -
Car03g01933 1209 ProSiteProfiles Zinc finger RanBP2 type profile. 257 287 IPR001876 -
Car03g01933 1209 ProSitePatterns Zinc finger RanBP2-type signature. 295 314 IPR001876 -
Car03g01933 1209 Gene3D alpha/beta hydrolase 901 1206 IPR029058 -
Car03g01933 1209 MobiDBLite consensus disorder prediction 644 704 - -
Car03g01933 1209 ProSiteProfiles Zinc finger RanBP2 type profile. 291 320 IPR001876 -
Car03g01933 1209 ProSitePatterns Zinc finger RanBP2-type signature. 261 281 IPR001876 -
Car03g01933 1209 MobiDBLite consensus disorder prediction 450 514 - -
Car03g01933 1209 SUPERFAMILY alpha/beta-Hydrolases 908 1188 IPR029058 -
Car03g01933 1209 MobiDBLite consensus disorder prediction 606 721 - -
Car03g01933 1209 SUPERFAMILY Ran binding protein zinc finger-like 251 287 IPR036443 -
Car03g01933 1209 PANTHER ZINC FINGER PROTEIN VAR3, CHLOROPLASTIC 3 800 - -
Car03g01933 1209 MobiDBLite consensus disorder prediction 415 527 - -
Car03g01933 1209 PANTHER ZINC FINGER PROTEIN 3 800 - -
Car03g01933 1209 Gene3D - 250 288 - -
Car03g01933 1209 Gene3D - 289 321 - -
Car03g01933 1209 MobiDBLite consensus disorder prediction 58 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01933 Car-Chr3 65383613 65392088 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01933 813 1208 Acyl Lipid Metabolism Gene Families AT5G17780 48.756 1.67e-124 388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01933 - - cam:101505193 1521.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01933 03 65383613 65392088 Car03g01933 03 65383613 65392088 ECH