Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01909 ATGGCCACTTTGAATAACACCAGCACACAAGTTCAACTGCAAAGTCTTCCATTTTCATCACACCCCATTGAGGAACAAGATTCAAGCTTTGCAAACACAGCAACAGTGGCAGGACAAACAGTGAGAACGGTATTTCAGATTCTTTTCTACTTGAATCTGATCCTGATTTCAGTCTTGGTGATTTTCATCACAATCTATGGTCTTGTCTTAGACTCTTTCACACACCATTTCCACCCTGAGAAGTGGTATCCACCACTTCTAGCATCAACAGTATGTGCAGGAATTCTTGGTTTCACATGGCAATGCGTAATTGCAAGCCACCCACAAAAGGCACTCGTGACGGCATTTTGGTTGAGTCCACTGTTAACATGTGCAATGGGAATTCTGTTTGTGTTATTCGGTTCTCCATGGAGTCTTGTAGCTGGTATGATTTCTTTGGTTTCTGCAGTGATTCAATCTCTCTATGGTTGCTGGGTCAGTAAGAGGTTTAAATACGCCGCTGAGATCTTGTCGGTTTCGATAGCTTATCCTCCTGCTAAAAGCAAATGCTTAGCATTCTCATCGATCGTCGTTAGTGTCCTTTACTGTTCTCTTCTTGTGTCTGGAATCGGAGGAGCAAGAGCTGTTGACAACAGAACCAAATTAGCAGACCTTTACATCTTGGTGATCGTGTTGAGCCTAGGATGGACTATGCAGGTTGTGAAGAATGCAATGCAAGTCACAATTTCAAGGGTCAAGTATATATATTTTGCTGGAGGTGGTGAAATGAACACCAGAATGGCGTTTTGCGACACAATGAAGTACTTAATTGGAAGTGTTTCTGTAGGTTCCATCCTTGTTCCTACCATTGGACTCTTCCGAGGCTTTGCGCGGTCGACGAGTCTGATCGGAGGAGAAACAAATGAGTGCATGTTTTCTTGTGTTAGTTGCTCTATGGGTATTGCTGCTCTTCTCGTGACATGGGGAAACAGATGGGGTTTTGTGCATGTTGGAGTTTATAACAAAGGGTTTGTGCAAGCATCTTCTGATACTTGGGAGATGTTCATTAGGGTTGGATTAGAGGAATTGATAGATTTAGATCTCACTGGTGCCTTCTGTTTCCTTAGTGGTGTAGCAGTAGGTGCATTCTGTTGTCTTCTTGGTGGTATTTGGAGTCTTATAGTGTACAAAAGCTATGCCATGGAAGTTTCCATTTATTCTTTCATCATTGGCTATTTCATGTGTAGGTTGGCTATTGCATGGCCACAAGCATGTGTTTCGGCTTACTATGTCGCCTATGCAGAGAACCCGCAGAGCACACAATTTGACTCGACTATACCAGTACGGCTGGAACAGCTTCACAGATTTCAAGCTTTACAAAGATCCTGA 1368 0.4306 MATLNNTSTQVQLQSLPFSSHPIEEQDSSFANTATVAGQTVRTVFQILFYLNLILISVLVIFITIYGLVLDSFTHHFHPEKWYPPLLASTVCAGILGFTWQCVIASHPQKALVTAFWLSPLLTCAMGILFVLFGSPWSLVAGMISLVSAVIQSLYGCWVSKRFKYAAEILSVSIAYPPAKSKCLAFSSIVVSVLYCSLLVSGIGGARAVDNRTKLADLYILVIVLSLGWTMQVVKNAMQVTISRVKYIYFAGGGEMNTRMAFCDTMKYLIGSVSVGSILVPTIGLFRGFARSTSLIGGETNECMFSCVSCSMGIAALLVTWGNRWGFVHVGVYNKGFVQASSDTWEMFIRVGLEELIDLDLTGAFCFLSGVAVGAFCCLLGGIWSLIVYKSYAMEVSIYSFIIGYFMCRLAIAWPQACVSAYYVAYAENPQSTQFDSTIPVRLEQLHRFQALQRS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01909 455 Pfam Plasma-membrane choline transporter 119 430 IPR007603 GO:0022857|GO:0055085
Car03g01909 455 PANTHER F20H23.27 PROTEIN-RELATED 23 450 - -
Car03g01909 455 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 23 450 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01909 Car-Chr3 65173355 65175495 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01909 - - lja:Lj1g3v3981460.1 687.952