Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01877 ATGCAGACAAGGACAGTTCAAGTGAAGCAACTTTCAGATCTAGCTACTGAGAGGGAGATTCACGAATTCTTCTCTTTTTCTGGAGAAATCGAGCACATTGAGATCGTAAGTGAATATGGGAAACCAAAGACTGCATTTGTGACATTTAAAGATCCTAGAGCGCTTGAAATTGCATTATTGTTATCGGGAGCAACAATAGTTGACCAAATTGTGAGTATAAGTCCAGCTGAGAACTATGTTGCAAATCGTGCAATGCAGGAAGTAAGGGTGGCGGAATATGCTATAAATGTTGCTCCTTCTGATGACGATGCATTGAATATTGAGGGGGAGAAACTGGGTTCAACCAATGGAAGAGTTTATCTTAGTAAAGCACAAGATGTAGTTACAAGTGTGCTGGCCAAAGGATCAGCGATAAGGCAAGATGCGGTGAACAAAGCTAAAGCATTTGATGAGAAGCATCAGTTGACTGCTAATGCATCTGCAAAGGTCAGTTCTTTTGATAGGAGAGTTGGACTGACGGAGAAATTGACAGTTGGACTTTCTGTAGTGAATGAGAAAGTGAAGTATGTGGATCAGAGGCTACATGTTTCAGATAAAACAATGGCAGCAATATTTGCAGCCGAGAGGAAGTTGAATGATACTGGATCAGCTGTCAAAACAAGCAGATATGTGACTGCTGGAACAGCATGGTTAAATGGTGCTTTTAGCAAGGTGGCAAAGGCCGGCAATGTTGCCGGCACAAAAACTAGAGAAAAGTTTAATATCGCTGTTTCGAACTTGACAGCAAAGGAACCCTCTTTGGTTGTGTAG 810 0.4173 MQTRTVQVKQLSDLATEREIHEFFSFSGEIEHIEIVSEYGKPKTAFVTFKDPRALEIALLLSGATIVDQIVSISPAENYVANRAMQEVRVAEYAINVAPSDDDALNIEGEKLGSTNGRVYLSKAQDVVTSVLAKGSAIRQDAVNKAKAFDEKHQLTANASAKVSSFDRRVGLTEKLTVGLSVVNEKVKYVDQRLHVSDKTMAAIFAAERKLNDTGSAVKTSRYVTAGTAWLNGAFSKVAKAGNVAGTKTREKFNIAVSNLTAKEPSLVV 269
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Car03g01877 269 SUPERFAMILY RNA-binding domain, RBD 2 83 IPR035979 GO:0003676
Car03g01877 269 SMART rrm1_1 5 74 IPR000504 GO:0003723
Car03g01877 269 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8 66 IPR000504 GO:0003723
Car03g01877 269 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 4 78 IPR000504 GO:0003723
Car03g01877 269 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 1 268 - -
Car03g01877 269 Gene3D - 1 87 IPR012677 -
Car03g01877 269 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 1 268 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Car03g01877 Car-Chr3 64906586 64910543 Transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01877 - - gmx:100779011 412.535