Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01868 ATGGCGAACGATCCAAATCAAACTCAAATGGCTCTAATTCTAGGACAGGATTCAACTCACTTGGAATCCCTAATCACAAACCTCATGTCCTCCTCCAACGACCAACGTTCCCAAGCCGAAAACCTCTTCAACCTCTGCAAACAAACCTACCCTGATTCCTTAATCCTTAAACTCTCTCAACTTCTTCACACTTCCCCTAACCAAGAAACACGTACCATGTCCACCATCCTTCTCCGCCGTCACCTCACGCGCCACCATGATGAATCCTTTATTTACCCACACCTTTCACCTTCAACTCAATCCACCCTCCGTTCCCTCCTCCTCTCGTCTCTCCATCAAGAGCCAGTCAAATCAATCGCTAAAAAACTTTGCGACACTGTTTCCGAACTTGCCTCCGCTCTTCTCTCCGATGACCTTGCTTCCTGGCCTGACCTTCTTCCGCTTCTTTTTCAGTGGGTTACTGCATCTGACACTAGGCTTCAGGAAATTTCTTTACTTGTGTTCGCTCAATTGGCTCATTATATCGGTGAAACCCTACTTCCTCAATTGTCCACCCTTCACTCTGTTTTCCTCCGCTGCCTCGGTGCTTCCACCTCTGCCGATGTCCGTATCGCTGCCCTTGCCGCTAGTATCAACTTCGTTCAGTGCCTCTCCAATCCCTCCGACCGCGACAGGTTTCAGGATTTGCTTCCCCTCATGATGCAGACATTGACTGAGGCATTGAATTCTGGTCAGGAGGCCACTGCGCAGGAGGCACTTGAGCTTCTCATTGAGCTTGCTGGGACTGAGCCACGGTTCCTGCGCAGGCAGATTGTTGATGTTGTTGGTGCCATGCTGCAGATTGCTGAGGCTGACTCTCTAGAAGAAGGGACTCGCCATTTGGCTATTGAGTTTATTGTTACACTTGCTGAGGCGAGGGAGCGTGCTCCTGGGATGATGAGGAAGCTACCGCAGTTTGTGAGTAAGCTGTTTGGTGTGCTGATGAATTTGCTGCTGGATATTGAGGATGATCCTGCTTGGCATGGTGCTGAGACTGAGGATGAGGATGCTGGTGAGACTAGTAACTATGGATTTGGACAGGAATGTTTGGATAGGCTTTCAATTGCTTTGGGTGGGAACACGATAGTTCCGGTTGCGTCTGAGTTGTTGCCAACTTACTTGGCTGCACCTGAATGGCAAAAGCACCATGCTGCACTCATTGCTCTTGCACAAATTGCAGAGGGTAGTTCAAAGGTGATGATAAAGAATTTGGAGCATGTGTTGTCAATGGTTTTGAATTCATTTCATGATCCACACCCCCGAGTGCGGTGGGCAGCTATAAATGCAATTGGGCAATTGTCCACAGACTTGGGGCCAGACTTGCAGGTTAAATATCACCAATTAGTGCTTCCGGCATTAGCTGGAGCCATGGATGATTTTCAAAATCCTCGAGTACAGGCACATGCTGCTTCTGCAGTGCTAAATTTCACTGAGAATTGCGCCCCAGATACCCTAACACCTTATTTGGATGGGATTGTGAGCAAACTTCTTGTACTACTGCAGACTGGAAAGCAAATGGTTCAAGAGGGTGCTTTGACAGCTTTAGCATCAGTTGCTGATTCTTCACAGGAGCAATTTCAAAAGTATTATGATGCTGTGATGCCATACCTAAAAGCTATTTTGATGAATGCAAATGATAAATCTAATCGAATGCTTCGTGCCAAAGCAATGGAGTGTATTAGTTTGGTAGGGATGGCTGTTGGAAAGGAGAAGTTCAAGGATGATGCCAAACAGGTCATGGATGTCTTGATGTCACTACAACAATCTCAACTGGATGCTGATGATCCAACCGCAAGTTACATGTTACAAGCATGGGCACGGCTTTGCAAGTGCCTCGGGCAGGATTTTCTCCCATACATGGGTTTTGTCATGCCTCCCTTGCTCCAGTCTGCACAACTTAAGCCTGACGTGACAATTACATCAGCAGATTCTGATGCTGAATTTGATGAAGATGATGACAGCATTGAAACCATCACTCTTGGGGACAAAAGAATAGGCATTAAGACCAGTGTCCTGGAGGAGAAGGCTACTGCATGCAACATGTTATGTTGTTACGCTGATGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTGGTCCCTCTTCTTAAATTTTACTTCCATGAAGAAGTTAGGAAGGCTGCAGTTTCAGCTATGCCAGAACTGCTGTCTTCAGCAAAATCGGCCATAGAGAAGGGGCAGTCACAAGGCCGTGATGCGTCTTACCTAAAGCAGTTGACTGATTATATAATACCAAATTTGGTGGAAGCATTACACAAGGAGCCAGAGGTGGAAATTTCTGCAGGCATGCTGGACGCACTGAATGAATGCATACAGGTCTCAGGACCACATTTAGATGAAAAACAAGTGAAGAGCATTGTTGATGAGATTAAAACAGTAATCACGGCCAGTTCATCCAGAAAACAAGAAAGAGCTGAGAGAGCCAAAGAAGAGGACTTCGATGCTGAAGAAAGGGAACTACTCAAGGAAGAAAATGAGCAAGAAGAAGAACTTTTTGATCAAATTGGGGACTGCTTGGGGACGCTGATAAAAACATTCAGGGCATCTTTTGTGCCTTTCTTTGATGAGCTTTCGTTGTACCTAACACCTATGTTTGGTAAAGACAAAACCACAGAGGAAAGGAGAATTGCCATTTGTATATTTGATGATGTTGCTGAGCACTGCCGCGAAGCAGCTCTTAAATATTATGATTCATATCTTCCATTATTGCTTGAAGCTTGCAATGATGAATGTTCAGATGTTCGACAGGCAGCTGTTTATGGGGTCGGTGTTTGTGCTGAGTTTGGTGGATCTGTTTTCAAACCCCTTGTTGGAGAGGCACTTTCTAGGTTAAATGCTGTGATAACACATCCAAATGCACGACATACTGATAATGTAATGGCATATGACAATGCTGTTTCAGCTCTTGGAAAAATATGCCAGTTCCACCGTGATAGCATAAATGCAGCACAGGTTGTTCCTGCCTGGCTAAGTTGCTTGCCTCTAAAAGGTGATTTAATTGAGGCTAAGGTTGTGCATGACCTACTTTGTTCAATGGTTGAAAGATCAGATAGAGAACTTATAGGTCAAAACAATCAATATCTTCCAAAGATTGTTGCAATTTTTGCCGAGATTTTATGTGCGGGAAATGATCTGGCAACTGAACAAACTGTGAGTCGGATGGTTAATTTATTGAGGCAACTTCAACAGACTTTGCCACCTTCTACCCTTGCTTCAACCTGGTCATCTTTGCACCCTCAGCAACAGCTTGCACTTCAATCCATCCTATCATCCTAG 3351 0.4512 MANDPNQTQMALILGQDSTHLESLITNLMSSSNDQRSQAENLFNLCKQTYPDSLILKLSQLLHTSPNQETRTMSTILLRRHLTRHHDESFIYPHLSPSTQSTLRSLLLSSLHQEPVKSIAKKLCDTVSELASALLSDDLASWPDLLPLLFQWVTASDTRLQEISLLVFAQLAHYIGETLLPQLSTLHSVFLRCLGASTSADVRIAALAASINFVQCLSNPSDRDRFQDLLPLMMQTLTEALNSGQEATAQEALELLIELAGTEPRFLRRQIVDVVGAMLQIAEADSLEEGTRHLAIEFIVTLAEARERAPGMMRKLPQFVSKLFGVLMNLLLDIEDDPAWHGAETEDEDAGETSNYGFGQECLDRLSIALGGNTIVPVASELLPTYLAAPEWQKHHAALIALAQIAEGSSKVMIKNLEHVLSMVLNSFHDPHPRVRWAAINAIGQLSTDLGPDLQVKYHQLVLPALAGAMDDFQNPRVQAHAASAVLNFTENCAPDTLTPYLDGIVSKLLVLLQTGKQMVQEGALTALASVADSSQEQFQKYYDAVMPYLKAILMNANDKSNRMLRAKAMECISLVGMAVGKEKFKDDAKQVMDVLMSLQQSQLDADDPTASYMLQAWARLCKCLGQDFLPYMGFVMPPLLQSAQLKPDVTITSADSDAEFDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLSSAKSAIEKGQSQGRDASYLKQLTDYIIPNLVEALHKEPEVEISAGMLDALNECIQVSGPHLDEKQVKSIVDEIKTVITASSSRKQERAERAKEEDFDAEERELLKEENEQEEELFDQIGDCLGTLIKTFRASFVPFFDELSLYLTPMFGKDKTTEERRIAICIFDDVAEHCREAALKYYDSYLPLLLEACNDECSDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLNAVITHPNARHTDNVMAYDNAVSALGKICQFHRDSINAAQVVPAWLSCLPLKGDLIEAKVVHDLLCSMVERSDRELIGQNNQYLPKIVAIFAEILCAGNDLATEQTVSRMVNLLRQLQQTLPPSTLASTWSSLHPQQQLALQSILSS 1116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01868 1116 Coils Coil 831 855 - -
Car03g01868 1116 Pfam Importin repeat 6 786 886 IPR041389 -
Car03g01868 1116 SMART TOG_3 369 610 IPR034085 -
Car03g01868 1116 Gene3D - 12 1115 IPR011989 -
Car03g01868 1116 Pfam HEAT repeats 386 485 - -
Car03g01868 1116 ProSiteProfiles HEAT repeat profile. 420 458 IPR021133 -
Car03g01868 1116 SUPERFAMILY ARM repeat 688 1091 IPR016024 -
Car03g01868 1116 SUPERFAMILY ARM repeat 19 821 IPR016024 -
Car03g01868 1116 Pfam Importin repeat 286 377 IPR041653 -
Car03g01868 1116 Pfam Interferon-related developmental regulator (IFRD) 489 625 IPR007701 -
Car03g01868 1116 Pfam Importin-beta N-terminal domain 50 111 IPR001494 GO:0006886|GO:0031267
Car03g01868 1116 PANTHER IMPORTIN BETA 11 1115 IPR040122 GO:0006606
Car03g01868 1116 Pfam HEAT repeat 925 952 IPR000357 GO:0005515
Car03g01868 1116 PANTHER BNAC09G37860D PROTEIN 11 1115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01868 Car-Chr3 64786465 64797407 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01868 K20222 - gmx:100797431 1868.2