Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01859 ATGAGACCTCCTAGAggtggtggccgtggtggtggtttcagaggtggccgtgatggcggcttcagaggtggacgtgacggaggttttcgtggcagaggtggtggacgtttcggcggtggtcgtggtggaggcggCTTTCGTGATGAAGGGCCTCCCTCCGAAGTCGTAGAGGTTTCAACGTTTATGCATGCTTGTGAAGGAGATGCTGTGACAAAGCTTACCAATGAGAAAATTCCATTTTTTAATGCTCCTATATATCTTCAAAACATGACTCAGATTGGGAAAGTTGATGAAATCTTTGGTCCCATCAATGAATCTTACTTTTCAATTAAAATGATGGAAGGGATTGTTGCTACTTCTTATTCAGCCGGTGACAAGTTTTACATTGACCCAAGGAAACTCTTGCCTCTTGCAAGATTTCTTCCTCAACCAAAGGGACAAGCACAAGCTGGTGGTAGAGGTGGAGGCGGAGGAGGTCGTGGTTTTGGTAGAGGTGGCCGTGGAGGCGGTGGTTTTCGCGGAAGAGGTCCTCCTAGGGGTGGTAGAGGTCCACCTAGGGGTGGTGGACGTGGGGGTGGTTTCCGGGGAAGGGGCAGGTTTTAG 603 0.3814 MRPPRGGGRGGGFRGGRDGGFRGGRDGGFRGRGGGRFGGGRGGGGFRDEGPPSEVVEVSTFMHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESYFSIKMMEGIVATSYSAGDKFYIDPRKLLPLARFLPQPKGQAQAGGRGGGGGGRGFGRGGRGGGGFRGRGPPRGGRGPPRGGGRGGGFRGRGRF 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01859 200 MobiDBLite consensus disorder prediction 1 52 - -
Car03g01859 200 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 199 - -
Car03g01859 200 SUPERFAMILY Translation proteins 56 130 IPR009000 -
Car03g01859 200 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 199 - -
Car03g01859 200 Pfam Gar1/Naf1 RNA binding region 55 141 IPR007504 GO:0001522|GO:0042254
Car03g01859 200 MobiDBLite consensus disorder prediction 144 200 - -
Car03g01859 200 Gene3D Probable tRNA pseudouridine synthase domain 51 142 IPR038664 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01859 K11128 - gmx:100788981 212.231