Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01829 ATGTTATTACAAGGTGCATTGGATCCAATTCTTCGTGCGACTCCGCCACTGAAGAAGAAGAAGAACACGTTTTGTTCTTCTTCTCTTTCACTGTTCTGCAATATCAATAGTAATTCTATCAGTAGAAGAAGCACGAAGACGAATTTGATGACTTCGAATAATAATAATAGTAGTCATAGAACCGATAATTATCTACGCCACATGGAATCAATGAAGATTCTTCCATCTGGTGCTGGTCGCATTCCTCATTTGAATGCCGTCATTCTTGGTGAATCTCTCGCTACTGAAGAAGATGATTTTGTGCTACCTAGCGAACAATTCGCTAATCAAGCAAATGTTCAATCTCCAGAACAGTATTTGGAGATGTATAAGAGATCTATTGAGGATCCTGCTGGATTTTGGTCTGAAATTGCATCACAGTTTTATTGGAAACAAAAATGGGGTCATCAAGTTGTTCATGAAAATTTTGATGTCACCAAAGGAAATATTAAGATTGAGTGGTTCAAGGGTGGAATCACAAACATATGTTATAATTGCTTGGATAGAAATGTGGAAGCTGGACTTGGTGACAAAGTAGCTCTTTACTGGGAAGGGAATGAACTTGATGTTGATGCTAAATTAACATACACTCAGCTTCTTCATCAAGTTTGTCAGGTTGCAAACTACCTGAAAGATATTGGTGTCAAAAAGGGTGATGCTGTGATTATTTATTTGCCCATGCTTATGGAGCTTCCTATCACAATGCTTGCATGTGCCCGCATTGGTGCTGTTCATTCGGTGGTATTTGCTGGTTTTTCTTCGGAATCTCTTTCACAGAGAATCATTGATTCTAAGGCAAAAGTTGTAATTACTTGTAATGCTGTTAAAAGGGGATCTAAGGTTATCTATCTGAAAGACATAGTTGATACTGCCATCAATGATTCAGCTCAAAATGGTGTCTCTATAGATGTATGCCTAACTTATGAAAACACGCTTGCATTGACGAGGGAGGATACTAAATGGAAGGAAGGGCGAGATATATGGTGGCAGGATGTCATTCCTCAATATCCAACTACTTGTCCAGTGGAGTGGCTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGTACTGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTATATGGTATACACTGCAACAACATTTAAGTATGCATTTGACTACAAACCATCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCAACTGTTGTTCTGTATGAAGGGGCTCCCAATTATCCTGATGCTGGGCGTAGCTGGAACATTGTTGACAAATATAAAGTAACAATATTCTACACAGCCCCTACATTGGTGCGGTCCCTCATGCGTGATAGTGATGAGTATGTTACCCGCTACTCGAGGAAATCTTTACGAGTCCTAGGAAGTGTTGGCGAGCCCATAAATCCAAGTGCATGGAGATGGTTTTACAATGTAATTGGAGATTCAAGATGCCCTATCTCTGACACTTGGTGGCAAACAGAAACTGGGGGCTTCTTGATAACTCCACTACCTGGCGCTTGGCCTCAGAAACCTGGTTCTGCTACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATAGTGGATGAGAAAGGTGTTGAGATAGATGGTGAGTGCAGTGGTTATTTGTGTGTTAAGAGATCATGGCCAGGGGCATTCAGAACTTTGTATGGGGATCATGAAAGATACGAAACAACATATTTCAAGCCCTTTGCTGGCTACTATTTCAGCGGTGATGGCTGCAGCAGGGATAAAGATGGATACTATTGGCTTACTGGAAGAGTTGACGATGTCATCAATGTCAGTGGGCATCGTATTGGCACAGCTGAAGTGGAATCAGCTCTAGTTTCACACGCACAATGTGCTGAGGCAGCCGTTGTAGGTGTGGAGCACGAGGTTAAAGGACAGAGTATATATGCTTTTGTTACTCTTGTGGACGGTGTTCCGTACAGTGATGAACTGCGGAAGGAGCTCGTACTAACAGTTCGAAAACAGATAGGAGCTTTTGCAGCACCTGACAAAATCCATTGGGCACCTGGCCTCCCAAAAACAAGGAGTGGAAAGATAATGAGAAGAGTTCTGAGAAAAATTGCTTCTAGGCAGCTAGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAATGTGGTCAACCAACTTATTGAACTTGCTGATTCATGA 2259 0.4197 MLLQGALDPILRATPPLKKKKNTFCSSSLSLFCNINSNSISRRSTKTNLMTSNNNNSSHRTDNYLRHMESMKILPSGAGRIPHLNAVILGESLATEEDDFVLPSEQFANQANVQSPEQYLEMYKRSIEDPAGFWSEIASQFYWKQKWGHQVVHENFDVTKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVALYWEGNELDVDAKLTYTQLLHQVCQVANYLKDIGVKKGDAVIIYLPMLMELPITMLACARIGAVHSVVFAGFSSESLSQRIIDSKAKVVITCNAVKRGSKVIYLKDIVDTAINDSAQNGVSIDVCLTYENTLALTREDTKWKEGRDIWWQDVIPQYPTTCPVEWLDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGATVVLYEGAPNYPDAGRSWNIVDKYKVTIFYTAPTLVRSLMRDSDEYVTRYSRKSLRVLGSVGEPINPSAWRWFYNVIGDSRCPISDTWWQTETGGFLITPLPGAWPQKPGSATFPFFGVQPVIVDEKGVEIDGECSGYLCVKRSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYYWLTGRVDDVINVSGHRIGTAEVESALVSHAQCAEAAVVGVEHEVKGQSIYAFVTLVDGVPYSDELRKELVLTVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRVLRKIASRQLDELGDTSTLADPNVVNQLIELADS 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01829 752 ProSitePatterns Putative AMP-binding domain signature. 366 377 IPR020845 -
Car03g01829 752 TIGRFAM Ac_CoA_lig_AcsA: acetate--CoA ligase 114 748 IPR011904 GO:0003987|GO:0016208|GO:0019427
Car03g01829 752 Gene3D - 623 752 IPR045851 -
Car03g01829 752 SUPERFAMILY Acetyl-CoA synthetase-like 104 747 - -
Car03g01829 752 PANTHER ACETYL-COENZYME A SYNTHETASE 72 752 - -
Car03g01829 752 CDD ACS 117 739 - -
Car03g01829 752 Gene3D - 98 622 IPR042099 -
Car03g01829 752 Pfam AMP-binding enzyme 188 627 IPR000873 -
Car03g01829 752 Pfam Acetyl-coenzyme A synthetase N-terminus 119 179 IPR032387 -
Car03g01829 752 Pfam AMP-binding enzyme C-terminal domain 636 714 IPR025110 -
Car03g01829 752 PANTHER ACETYL-COENZYME A SYNTHETASE 72 752 - -
Car03g01829 752 Hamap Acetyl-coenzyme A synthetase [acs]. 96 750 IPR011904 GO:0003987|GO:0016208|GO:0019427
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01829 Car-Chr3 64351856 64361250 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01829 61 751 Acyl Lipid Metabolism Gene Families AT5G36880 82.634 0.0 1234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01829 K01895 - gmx:100789257 1323.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01829 03 64351856 64361250 Car03g01829 03 64351856 64361250 ECH