Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01819 ATGGGGGTACATTCTCCAGTTGTAGCCAAAAGACTATGGAATGTGTTGAGAATCACATTCTTTATGATGAGGAAGGGTCTTATatcaaagaggaaaatgataatggacatgaatttgatgatgaaaaAAGGGAAATTGCTCAGAAAAAGTTTGAGCAATCTCATGTCATCAAAAAATGTGACACAACGTAATGGTGGTTTTATGGTACATGATTATGAATTCTCTTGTAGTAATAGCCCAAATCCTGTTTTTTTCAACATGCCCAAAAGGAAGCACCATTTCAATTTCCCTTGCATCAATTCTCCAGATGTTATCGAAGAGGAAACTTTACCTTATCATCAATATCAATTGTCACAAATTGAAAGTGATAATATTAATGTGACTAAGGGTAATGTTGCTATGGGGCCTAAGACACCAGAATACACATTCAATTTCAGGTTTGATGCATCTGAGTTTGGTGTTGGAGAGGAAAAAAGTCCACTTCTCTCACCCTTTTCAGTAAGGGTATCCAATTACTCTGCTTTGGAGGAAATTGAAGAAGTTGGAAATTGTCAAGTTGATGATGAGGCTGAGAATTTCATTAGAAAGTTCTATGAACAGCTGAGGACTCAAAACCGTTTGCAATTACCCGGGTTTTAA 639 0.3459 MGVHSPVVAKRLWNVLRITFFMMRKGLISKRKMIMDMNLMMKKGKLLRKSLSNLMSSKNVTQRNGGFMVHDYEFSCSNSPNPVFFNMPKRKHHFNFPCINSPDVIEEETLPYHQYQLSQIESDNINVTKGNVAMGPKTPEYTFNFRFDASEFGVGEEKSPLLSPFSVRVSNYSALEEIEEVGNCQVDDEAENFIRKFYEQLRTQNRLQLPGF 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01819 212 Pfam Cotton fibre expressed protein 185 204 IPR008480 -
Car03g01819 212 PANTHER OS01G0930500 PROTEIN 1 209 - -
Car03g01819 212 PANTHER AVR9/CF-9 RAPIDLY ELICITED PROTEIN-RELATED 1 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01819 Car-Chr3 64275125 64276226 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01819 - - tcc:18601169 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01819 03 64275125 64276226 Car03g01819 03 64275125 64276226 ECH