Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01817 ATGTCGTTGTCCACCGCCTCACCTCCACCGTCGTTAGAAGACGAATGCTTACATCACGACAGTGACAGTTACAACGTCAACGATGACGACACTTCGTTCGGCGTCGTTTCACTAGACGAGGAGGGGTTCCCGTCACAAGTCCCACTCGAAGACGCTTCACCAAACGAATCAGAGAAGAGCACTTTCGCCGCCGATTTCTATCGCTGCGGATCCGATTGGTCGTCTCTGTTGTCGCCAGAAGTTCATAAACAAAGAGATCCCGCGCGTGATTCGATATCTTCGGGGAAGAAATTGAAGCAAGCCAATCTCTTTCAGATTTGGGGATTCAAAAGAAATGTTGACGTTGGTTCTGTTGAAGTTGAACCTAATCAAGGTGGTTATTGTGATGAAGTAGGTGAGGGTAGTGTTTCATCTGAGAGGAAGATTGTTAAACCTGGAAATTGGGGTTCGATTTTGCGTGATAAAGGGAAAGTGGTTGAGAATCCAAAATCTTCTACCAAGAGAAAGAGTTTTTCTGGAGAGAATAGGGTTACACGTTCCTGTCCTTTCTATAAAAAGATGCCAGGAACAAACTTCACAGTTGATGCTTTTCGTTATGGATGTGTTGAGGAGTGCTCAGCTTACTTTCTTAGTCATTTCCATGCCGACCACTATGGTGGTCTTAGCAAAAAATGGTCACATGGCCCTATTTATTGCTCTCCTCTTACTGGACGGCTAGTTCAAATGTGTCTCTATGTAAATCCTTCGTACATCTTCCCTTTAGAATTTGACACTGAATATGTGATTGAGGGTACCAAAGTGACTTTGATAGATGCTAATCATTGCCCTGGTGCAGCTTTGATCCACTTTGAGCTCCCAAATGGACAATGTTATTTACACACTGGGGACTTCAGAGCTTGTAAACTAATGCAAGGCTACAATCTATTTGTAAATAAACGTGTGAATGTACTATATTTGGATACTACATATTGCAACCCAAAGTACAAGTTTCCTTTCAAGGAAGATGTACTCAACTATGTTGTCAAAATTACAAAGAACCACCTCAAAATGCATCCCAGAACTTTAGTGGTTGTTGGAGCATACAGTATTGGCAAAGAATGTGTATATCTTGCAATTTCTAAGGCGCTTGGGGTAAAAATCTATGCAAATGCTTCAAGAAGAAGGATACTGCTAGCTTATGGTTCGCCTGACTATTCAGATAGACTCTGTACAAATGGAAATAACACACTTCTCCATGTTCTGCCCATGTCATCTCTGAGAATTGAGACTTTGAAGGAATACTTGAAGACCTACAAGGAACAATTCACATCAGTTTTGGCATTTCGGCCAACAGGTTGGACTTTCAGTGAGAAGATAGGCAACGATCTGGAACTAATTAGACCTGTTTCCAGAGGAAATATCACAACATATGGGGTTCCCTACAGTGAGCACTCCAGCTTCACAGAACTGCGGGATTTTGTTCAGTTTTTGAGGCCCGACAAGATAGTTCCTACTGTGAATGTTGGTAATTCTGCTAATCGAGAAAAGATGCAATCTTACTTTGGAGACTGGTTGAAGAACTAA 1563 0.421 MSLSTASPPPSLEDECLHHDSDSYNVNDDDTSFGVVSLDEEGFPSQVPLEDASPNESEKSTFAADFYRCGSDWSSLLSPEVHKQRDPARDSISSGKKLKQANLFQIWGFKRNVDVGSVEVEPNQGGYCDEVGEGSVSSERKIVKPGNWGSILRDKGKVVENPKSSTKRKSFSGENRVTRSCPFYKKMPGTNFTVDAFRYGCVEECSAYFLSHFHADHYGGLSKKWSHGPIYCSPLTGRLVQMCLYVNPSYIFPLEFDTEYVIEGTKVTLIDANHCPGAALIHFELPNGQCYLHTGDFRACKLMQGYNLFVNKRVNVLYLDTTYCNPKYKFPFKEDVLNYVVKITKNHLKMHPRTLVVVGAYSIGKECVYLAISKALGVKIYANASRRRILLAYGSPDYSDRLCTNGNNTLLHVLPMSSLRIETLKEYLKTYKEQFTSVLAFRPTGWTFSEKIGNDLELIRPVSRGNITTYGVPYSEHSSFTELRDFVQFLRPDKIVPTVNVGNSANREKMQSYFGDWLKN 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01817 520 SMART Lactamase_B_5a 178 328 IPR001279 -
Car03g01817 520 Pfam DNA repair metallo-beta-lactamase 399 503 IPR011084 -
Car03g01817 520 PANTHER DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED 79 519 - -
Car03g01817 520 CDD SNM1A-1C-like_MBL-fold 169 326 - -
Car03g01817 520 MobiDBLite consensus disorder prediction 1 31 - -
Car03g01817 520 PANTHER DNA CROSS-LINK REPAIR PROTEIN SNM1 79 519 - -
Car03g01817 520 Gene3D - 329 477 - -
Car03g01817 520 SUPERFAMILY Metallo-hydrolase/oxidoreductase 203 506 IPR036866 -
Car03g01817 520 Gene3D - 188 499 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01817 Car-Chr3 64265855 64269738 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01817 K15340 - gmx:100790844 813.913