Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01808 ATGGATCATGTTTTGTTAGCATCACAGGAAACGAAGGAAGAAAGGGATAAGAGAATTCGAAGCCTTTTCAATTTCTTCGATAAGGAGAATCGTGGTTATTTGGAATTTTCACACATTGAAGCTGGTTTATCTGCCCTTGAGATTCCGTCTGAGTATAAATATGCTACGGATTTGTTGAATGCTTGTGATGCAAACAAAGATAACCGTGTTGATTTTGTTGAATTTAAGAAATATATGGATGATAAAGAGGTTGAACTTTACCGTATATTTCAAGCTATTGACGTTGAACATAATGGTTGCATTTTGCCAGAGGAGCTTTGGGAGGCACTTGTAAGAGCAGGGATTAAAATTGATGACAAGGAACTCGCACATTTTGTTGAACGTGTTGACAAGGATCATAATGGTGTTATAACATTTGAGGAATGGAGGGACTTTCTGCTGCTTTACCCTCACGAGGCAACTATTGAGAACATTTACCATTATTTGGAGCGGATATGCATGGTTGATATTGGGGAGCATACCGTTATTCCCGCTGGTGTTGGTAAGCACATTCATGCAAGTAGGTATCTGATTGCTGGAGGAGTAGCAGGTGCTGCATCACGCACTGCAACTGCACCTCTCGACCGTCTAAAGGTTGTATTGCAAGTCCAAACAACACGAGCTCGTATAATGCCAGCAGTAAAAGATATTTGGAAAGAAGGTGGTATAGTAGCATTTTTTCGAGGCAATGGCTTAAATGTTCTTAAGGTGGCCCCTGAGAGTGCCATTAGATTTTATACCTATGAGATGATGAAGACCTTCATTGTAGATGCTAAAGGTGGAGAAGTGAAAGCCGATATTGGAGGTATGGGGCGGCTGCTGGCTGGTGGTATAGCTGGAGCTGTAGCTCAAACTGCGATATATCCTATGGATCTTGTGAAGACACGGCTACAAACATTTACTTGTGCAAGTGGAAAAATTCCTAGTCTTGGAACCCTTTCAAAAGATATATGGGTTCAAGAAGGACCCCGTGCTTTTTATAGGGGATTGATTCCTTCTATTCTTGGGATTATCCCGTATGCGGGGATAGATCTAGCTGCTTATGAAACCTTGAAGGAGATGTCCAAAAAGTATATTATTCAGGATGGAGAACCTGGCCCTCTGGTACAATTAGGATGTGGGACGGTATCAGGAGCTCTTGGAGCAACATGCGTTTACCCATTACAGGTCGTTAGAACAAGAATGCAGGCCCAAAGCTCTTATAAAGGAATGGCTGATGTATTCAGAAAAACCTTGGAACATGAAGGATTTAGGGGATTCTACAAAGGAATATTTCCCAACTTGCTCAAAGTTGTCCCATCAGCAAGTATCACTTACATGGTTTATGAGTCTATGAAAAAAAGTTTGGATTTAGAGTGA 1398 0.4127 MDHVLLASQETKEERDKRIRSLFNFFDKENRGYLEFSHIEAGLSALEIPSEYKYATDLLNACDANKDNRVDFVEFKKYMDDKEVELYRIFQAIDVEHNGCILPEELWEALVRAGIKIDDKELAHFVERVDKDHNGVITFEEWRDFLLLYPHEATIENIYHYLERICMVDIGEHTVIPAGVGKHIHASRYLIAGGVAGAASRTATAPLDRLKVVLQVQTTRARIMPAVKDIWKEGGIVAFFRGNGLNVLKVAPESAIRFYTYEMMKTFIVDAKGGEVKADIGGMGRLLAGGIAGAVAQTAIYPMDLVKTRLQTFTCASGKIPSLGTLSKDIWVQEGPRAFYRGLIPSILGIIPYAGIDLAAYETLKEMSKKYIIQDGEPGPLVQLGCGTVSGALGATCVYPLQVVRTRMQAQSSYKGMADVFRKTLEHEGFRGFYKGIFPNLLKVVPSASITYMVYESMKKSLDLE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01808 465 ProSiteProfiles EF-hand calcium-binding domain profile. 14 49 IPR002048 GO:0005509
Car03g01808 465 PANTHER SOLUTE CARRIER FAMILY 25 36 462 - -
Car03g01808 465 Gene3D - 4 162 - -
Car03g01808 465 ProSiteProfiles EF-hand calcium-binding domain profile. 117 152 IPR002048 GO:0005509
Car03g01808 465 PRINTS Mitochondrial carrier protein signature 189 202 IPR002067 GO:0055085
Car03g01808 465 PRINTS Mitochondrial carrier protein signature 202 216 IPR002067 GO:0055085
Car03g01808 465 PRINTS Mitochondrial carrier protein signature 242 262 IPR002067 GO:0055085
Car03g01808 465 PRINTS Mitochondrial carrier protein signature 295 313 IPR002067 GO:0055085
Car03g01808 465 PRINTS Mitochondrial carrier protein signature 340 358 IPR002067 GO:0055085
Car03g01808 465 PRINTS Mitochondrial carrier protein signature 387 409 IPR002067 GO:0055085
Car03g01808 465 Gene3D Mitochondrial carrier domain 180 463 IPR023395 -
Car03g01808 465 PANTHER CALCIUM-BINDING MITOCHONDRIAL CARRIER PROTEIN SCAMC-1-B-LIKE 36 462 - -
Car03g01808 465 SUPERFAMILY Mitochondrial carrier 182 456 IPR023395 -
Car03g01808 465 ProSiteProfiles Solute carrier (Solcar) repeat profile. 280 367 IPR018108 -
Car03g01808 465 ProSiteProfiles Solute carrier (Solcar) repeat profile. 184 267 IPR018108 -
Car03g01808 465 ProSiteProfiles EF-hand calcium-binding domain profile. 81 116 IPR002048 GO:0005509
Car03g01808 465 SMART efh_1 121 149 IPR002048 GO:0005509
Car03g01808 465 SMART efh_1 18 46 IPR002048 GO:0005509
Car03g01808 465 SMART efh_1 85 113 IPR002048 GO:0005509
Car03g01808 465 SMART efh_1 54 82 IPR002048 GO:0005509
Car03g01808 465 ProSiteProfiles Solute carrier (Solcar) repeat profile. 378 461 IPR018108 -
Car03g01808 465 Pfam Mitochondrial carrier protein 183 270 IPR018108 -
Car03g01808 465 Pfam Mitochondrial carrier protein 283 370 IPR018108 -
Car03g01808 465 Pfam Mitochondrial carrier protein 379 462 IPR018108 -
Car03g01808 465 SUPERFAMILY EF-hand 10 179 IPR011992 -
Car03g01808 465 Pfam EF-hand domain pair 85 144 IPR002048 GO:0005509
Car03g01808 465 ProSitePatterns EF-hand calcium-binding domain. 130 142 IPR018247 -
Car03g01808 465 Pfam EF-hand domain pair 49 81 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01808 Car-Chr3 64200501 64203409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01808 1 465 EF-hand Containing Proteins AT5G51050 71.674 0.0 706
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01808 K14684 - gmx:100775805 848.195