Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01807 ATGTCGTTTGTACCAGCAAGAACGGGGAGACAAAAACAACGTTATGAAGACAACCTTCGACTTGTTTCTGGATGTATTCCCTATAGatggagaaaggagaatgcagatgaaatggaaaaGACTGTGGAGTTAATAGAAGTACTTATGGTTTCTTCTCCAAAACGCGATGACCTTGTATTTCCAAAGGGTGGTTGGGAGGATGATGAGACTGTTACAGAAGCCGCTTGTCGCGAAGCGTTAGAAGAAGCAGGAGTTAAAGGAGTACTAAGAGAAATTCCATTAGGAATATGGGAGTTCAGAAGCAAAAGCAGTCAGGACTTGTGTAGTAGCATTGAAGGAGGCTGCAGAGGATACATGTTTGCCTTGGAGGTGACCGAAGAACTTGAGGCTTGGCCCGAGCAGAAAAACTGTGCTCGCCAATGGTTAAACATAAAAGAAGCATTTAGACTCACCCGATACGATTGGATGTGTAACGCGCTGGAGGAGTTTATGCGAGTTATGACAGACGACGGTAAGCTTGAGAAGCAAGACGAAAATGTCGATCCAGTTGATGTCTCAGAATGTCAAAGTCTTTCACCCAACTGCTACAAAAGATCCTCTAATATGCAGCATCATGGCGTGCCTTCTAAATCGAATCTACTTCAGCGTGCTCAAGAGATAGCCATTCATTTTGGCTATTGA 681 0.42 MSFVPARTGRQKQRYEDNLRLVSGCIPYRWRKENADEMEKTVELIEVLMVSSPKRDDLVFPKGGWEDDETVTEAACREALEEAGVKGVLREIPLGIWEFRSKSSQDLCSSIEGGCRGYMFALEVTEELEAWPEQKNCARQWLNIKEAFRLTRYDWMCNALEEFMRVMTDDGKLEKQDENVDPVDVSECQSLSPNCYKRSSNMQHHGVPSKSNLLQRAQEIAIHFGY 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01807 226 ProSitePatterns Nudix box signature. 63 84 IPR020084 GO:0016787
Car03g01807 226 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 167 - -
Car03g01807 226 ProSiteProfiles Nudix hydrolase domain profile. 18 164 IPR000086 -
Car03g01807 226 CDD Nudix_Hydrolase_9 21 156 - -
Car03g01807 226 SUPERFAMILY Nudix 6 165 IPR015797 -
Car03g01807 226 Pfam NUDIX domain 47 156 IPR000086 -
Car03g01807 226 PANTHER NUDIX HYDROLASE 12, MITOCHONDRIAL 1 191 - -
Car03g01807 226 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01807 Car-Chr3 64173080 64177838 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01807 K07766 - gmx:100794003 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01807 03 64173080 64177838 Car03g01807 03 64173080 64177838 ECH