Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01804 ATGGTGACCGTGGAGGAGATTCGCAATGCACAACGTTCCAATGGCCCTGCCACTATCTTGGCTTTTGGCACAGCCACTCCCTCCAATTGCATAACACAAGCTGACTATCCTGATTACTACTTCCGGATCACCAACAGCGAACACATGACCGACCTCAAGGAAAAATTCAAGCGCATGTGCGAGAAATCGATGATAAAGAAACGATATATGCACCTAACAGAGGAATTTCTGAAAGAGAATACAAACATGTGTGCTTACATGGCACCATCGCTAGACGTAAGACAAGACATAGTGGTAGTGGAAGTTCCAAAGCTAGGCAAAGAAGCAGCAAAAAAAGCAATAAGCGAGTGGGGCCAACCAAAATCCAAAATCACTCATCTCGTTTTTTGCACCACATCAGGCGTAGACATGCCCGGAGCAGATTACCAGCTCACCAAACTCTTAGGCCTTAAACCCTCCGTCAAACGCCTCATGATGTATCAACAAGGTTGCTTCGCCGGCGGCACCGTTCTCCGCTTAGCCAAAGACCTTGCTGAGAATAACAAAAACGCTAGAGTCCTTGTCGTTTGTTCAGAAATCACCGCCGTTACTTTCCGTGGCCCCTCCGATACTCATTTGGACTCACTAGTTGGACAGGCGCTTTTTGGTGACGGCGCCGCCGCAATGATTATCGGCGCTGATCCGGATTTAACTGTGGAGCGTCCGATTTTTGAGATTGTATCAGCCGCTCAAACTATTCTTCCTGATTCTGATGGCGCGATTGATGGACATCTCCGTGAAGTGGGGCTCACTTTTCATCTTCTTAAGGACGTTCCAGGGATTATTTCGAAGAACATTGAGAAGAGTTTGGTGGAAGCTTTTTCACCTATTGGCATTACTGACTGGAATTCGATTTTTTGGGTTGCACATCCGGGTGGACCGGCTATACTAGACCAGGTTGAAGAAAAACTCCGGCTCAAAGAGGATAAACTCCGATCCACTCGACACGTGCTTAGTGAGTATGGAAATATGTCTAGCGCCTGTGTTCTATTTATTTTGGATGAGTTGAGGAAAAAGTCTAAAGAAGAAGGGAAAAACACAACCGGTGATGGGTTTGAATGGGGTGTTTTGTTTGGATTTGGACCGGGTTTAACGGTTGAGACCGTTGTGCTTCACAGTGTTCCTATTCAGGGTTGA 1176 0.466 MVTVEEIRNAQRSNGPATILAFGTATPSNCITQADYPDYYFRITNSEHMTDLKEKFKRMCEKSMIKKRYMHLTEEFLKENTNMCAYMAPSLDVRQDIVVVEVPKLGKEAAKKAISEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKNARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAMIIGADPDLTVERPIFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGIISKNIEKSLVEAFSPIGITDWNSIFWVAHPGGPAILDQVEEKLRLKEDKLRSTRHVLSEYGNMSSACVLFILDELRKKSKEEGKNTTGDGFEWGVLFGFGPGLTVETVVLHSVPIQG 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01804 391 Pfam Chalcone and stilbene synthases, N-terminal domain 5 228 IPR001099 -
Car03g01804 391 Gene3D - 236 391 IPR016039 GO:0016746
Car03g01804 391 PANTHER HYDROXYMETHYLGLUTARYL-COA SYNTHASE 2 389 IPR011141 GO:0009058|GO:0016747
Car03g01804 391 CDD CHS_like 16 384 - -
Car03g01804 391 Pfam Chalcone and stilbene synthases, C-terminal domain 238 388 IPR012328 -
Car03g01804 391 Gene3D - 1 235 IPR016039 GO:0016746
Car03g01804 391 Coils Coil 310 330 - -
Car03g01804 391 SUPERFAMILY Thiolase-like 1 232 IPR016039 GO:0016746
Car03g01804 391 PIRSF PKS_III 2 389 IPR011141 GO:0009058|GO:0016747
Car03g01804 391 PANTHER CHALCONE SYNTHASE 2 2 389 - -
Car03g01804 391 ProSitePatterns Chalcone and stilbene synthases active site. 156 172 IPR018088 GO:0009058|GO:0016746
Car03g01804 391 SUPERFAMILY Thiolase-like 235 387 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01804 Car-Chr3 64067522 64069937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01804 138 374 Miscellaneous Gene Families AT2G16280 21.190 5.61e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01804 K00660 - gmx:100775264 732.635
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01804 03 64067522 64069937 Car03g01804 03 64067522 64069937 ECH