Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01796 ATGTTGAGGGTTGCAGCTAAGAAGCTTTCTTCTCTCTCCTCATCTCAATCATGGAGGGCTAACTACGCCGCCTCCGCTTTCCTCTCTAAGAACCCTATCGCACCGACTTCTTCATCCGATGAACGTAGATCTGATCCCTTTTCGATCCAACCTGAATTCTTTCTCCCCTTCAGAGGTTTTGCTTCTGAATCACTGATCCGCTCCAAAGAAAACAGCATTATTCCTGATATCCCCGCAACTGTTGCAGCTGTTAAAAATCCTTCTTCTAAGATTGTATATGATGATCACAACTATGAACGATTTCCTCCTGGTGACCCAAGCAAGAGGGCATTTGCATACTTTGTCCTAACTGGTGGAAGGTTTGCTTATGCATCTCTGATCCGTCTTCTTGTCCTCAAGTTTGTGCTCAGCATGTCGGCAAGTAAGGATGTTCTTGCTATGGCTTCACTTGAAGTAGATCTCTCCAGCATTGAGCAAGGCACTACTGTCACTGTTAAGTGGCGTGGAAAGCCAGTTTTCATCAGGCGCAGAACAGATGATGATGTGAAGCTGGCAAACAGTGTTGATGTTGCATCTCTCCGTGATCCCCAGCCAGATTCTGACAGAGTCAAGAACCCAGAATGGCTTATTGTGATTGGTGTTTGCACACATCTTGGTTGTATTCCCTTACCAAATGCTGGGGACTATGGTGGATGGTTTTGCCCATGCCATGGATCACATTATGATATTTCTGGCAGAATTAGGAAGGGACCTGCACCATACAATCTGGAGGTACCTACTTATACATTCTTGGAGGAAAACAAGTTGTTGATTGGTTGA 819 0.4518 MLRVAAKKLSSLSSSQSWRANYAASAFLSKNPIAPTSSSDERRSDPFSIQPEFFLPFRGFASESLIRSKENSIIPDIPATVAAVKNPSSKIVYDDHNYERFPPGDPSKRAFAYFVLTGGRFAYASLIRLLVLKFVLSMSASKDVLAMASLEVDLSSIEQGTTVTVKWRGKPVFIRRRTDDDVKLANSVDVASLRDPQPDSDRVKNPEWLIVIGVCTHLGCIPLPNAGDYGGWFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLLIG 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01796 272 SUPERFAMILY ISP domain 134 271 IPR036922 GO:0051537
Car03g01796 272 TIGRFAM Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 129 272 IPR006317 GO:0008121
Car03g01796 272 SUPERFAMILY ISP transmembrane anchor 89 145 - -
Car03g01796 272 PRINTS Rieske 2Fe-2S subunit signature 210 221 IPR005805 GO:0016020|GO:0051537
Car03g01796 272 PRINTS Rieske 2Fe-2S subunit signature 232 244 IPR005805 GO:0016020|GO:0051537
Car03g01796 272 PRINTS Rieske 2Fe-2S subunit signature 244 256 IPR005805 GO:0016020|GO:0051537
Car03g01796 272 CDD Rieske_cytochrome_bc1 149 272 - -
Car03g01796 272 Pfam Ubiquinol cytochrome reductase transmembrane region 103 143 IPR004192 GO:0008121
Car03g01796 272 Pfam Rieske [2Fe-2S] domain 155 258 IPR017941 GO:0051537
Car03g01796 272 Gene3D - 141 272 IPR036922 GO:0051537
Car03g01796 272 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 202 270 IPR017941 GO:0051537
Car03g01796 272 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 272 - -
Car03g01796 272 PANTHER CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL 1 272 IPR014349 GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01796 K00411 - gmx:100806917 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01796 03 63946520 63948772 Car03g01796 03 63946520 63948772 ECH