Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01780 ATGTGTGCTTTCAAATTTACCCAAGATCCACCAAAGGTCAACACTCTTCTAGTTTCCCTTAGAATCAGATCTTCACTTTCTCACCACATCATGATCAGAACACTACCCAGGAAGTTGAAGCTCAAGAACATCACCAATGGTACTTTGATTCAAAAAAGCAGCAGATTCTATGCAACGGTTGGTGGAAGAAGCAGGCTAGAAGGAAAAGTGGCAATCATAACAGGGTCAGCAAGTGGACTTGGAAAGGCTACAGCCCATGAATTTGTCCAACACGGGGCCCAAGTCATAATCGCCGACACTGACACTAAACTTGGGCCACAAGTTGCAAAACAATTGGGCCCTTCAGCACAGTATGTTGAATGTGATGTCACCGTTGAGGCCCAAATAGAAGAAGCTGTAAATGTGGCCATCACAAACTATGGTAAACTAGACATCATGTACAACAATGCTGGTATAACAGGCCCAATAAGCCCACCAAGCATAACCGAATTGGACCTTGATGAATTTGACAAAGTTATGAGAATCAATGTAACGGGAATCATTTCGGGTATAAAGCATGCGGCCCGTGTGATGATCCCAAAGGGCTATGGGTCCATTATATGCACATCAAGCATAAGTGGGCTATTTGGTGGGCTTGGGCCACACCCATATACAATATCAAAGTCTACAATACCTGGGGTGGTGAAATCTGTGGCTAGTGAACTATGTGGAGTTGGGATTAGAGTCAATTGTATATCACCAGCTGCAATTCCTACACCAATGTCATTGACTCAAGTTGGAAAATTTCTTCCTGGTTTTACCCAAGAACAAATAGCTGAAGTTGTGAGTGGGCTTGGTGTTCTAAAAGGTGCAAAATGTGAGGACATTGATGTGGCTAGGGCTGCATTATATTTAGCTTCGGACGAAGCCAAGTTTATTTCGGGTCACAATCTCATAGTTGATGGAGGGTTCACCTCCTTTAAAAATTTTGTGTTTCCTTCTCCGGATAAAACGGTCTAA 999 0.4314 MCAFKFTQDPPKVNTLLVSLRIRSSLSHHIMIRTLPRKLKLKNITNGTLIQKSSRFYATVGGRSRLEGKVAIITGSASGLGKATAHEFVQHGAQVIIADTDTKLGPQVAKQLGPSAQYVECDVTVEAQIEEAVNVAITNYGKLDIMYNNAGITGPISPPSITELDLDEFDKVMRINVTGIISGIKHAARVMIPKGYGSIICTSSISGLFGGLGPHPYTISKSTIPGVVKSVASELCGVGIRVNCISPAAIPTPMSLTQVGKFLPGFTQEQIAEVVSGLGVLKGAKCEDIDVARAALYLASDEAKFISGHNLIVDGGFTSFKNFVFPSPDKTV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01780 332 PANTHER ALCOHOL DEHYDROGENASE-LIKE PROTEIN 38 329 - -
Car03g01780 332 Pfam Enoyl-(Acyl carrier protein) reductase 75 318 - -
Car03g01780 332 Gene3D - 59 325 - -
Car03g01780 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 67 318 IPR036291 -
Car03g01780 332 PANTHER 3-OXOACYL-(ACYL-CARRIER-PROTEIN) REDUCTASE (AFU_ORTHOLOGUE AFUA_6G11210) 38 329 - -
Car03g01780 332 PRINTS Glucose/ribitol dehydrogenase family signature 70 87 IPR002347 -
Car03g01780 332 PRINTS Glucose/ribitol dehydrogenase family signature 141 152 IPR002347 -
Car03g01780 332 PRINTS Glucose/ribitol dehydrogenase family signature 191 207 IPR002347 -
Car03g01780 332 PRINTS Glucose/ribitol dehydrogenase family signature 217 236 IPR002347 -
Car03g01780 332 PRINTS Glucose/ribitol dehydrogenase family signature 238 255 IPR002347 -
Car03g01780 332 PRINTS Glucose/ribitol dehydrogenase family signature 281 301 IPR002347 -
Car03g01780 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 152 IPR002347 -
Car03g01780 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 197 205 IPR002347 -
Car03g01780 332 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 217 236 IPR002347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01780 Car-Chr3 63695462 63700231 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01780 66 318 Acyl Lipid Metabolism Gene Families AT1G63380 32.576 5.91e-27 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01780 - - cam:101504238 649.818
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01780 03 63695462 63700231 Car03g01780 03 63695462 63700231 ECH