Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01770 ATGAATTATTTTCCAGACGAGGTAATAGAACATGTGTTTGACTATGTGGTGTCACATAGTGACCGAAACGCTTTGTCTTTGGTATGCAAAAGTTGGTGTAGAATAGAGAGATTTACAAGACAAAGAGTTTTCATAGGGAACTGTTACTCTATTAGTCCTGAGAGGTTGGTCCAAAGGTTTCCAAGTCTCAAATCTTTAACTTTGAAAGGAAAACCTCATTTTGCTGACTTTAGTTTGGTTCCTCATGGTTGGGGTGGTTTTGTCTATCCATGGATTGAAGCACTGGCTAAGAGTAAAGTTGGATTGGAGGAGCTTAGGTTGAAGAGAATGGTTGTCTCTGATGATAGCCTAGAGCTACTTTCTCGTTCTTTCATGGATTTTAAGTCTTTAGTTCTTGTTAGTTGTGAAGGGTTCACCACTGATGGTCTTGCTGCTGTAGCTGCAAATTGCAGGTCTCTTAGGGAGCTGGACTTGCAAGAGAATGAAGTTGAAGACCACAAAGGACAGTGGCTAAGTTGTTTTCCCGAAAGCTGCACATCACTTGTCTCTCTGAATTTTGCTTGCCTTAAAGGAGAAATTAATTTGGGAGCacttgagagacttgtggcaagatctcctaacctcaagagtttaaggttgAACCGTTCTGTGCCTGTTGATGCACTTCAAAAGATACTGATGCGAGCGCCTCAGCTAGTGGATTTGGGTATTGGGTCATTTTTCCATGATCTCAACTCAGATACCTATGCGAAGCTTAAGGCTACCATTCTTAAGTGCAAGTCAATAACCAGTTTGTCGGGGTTTTTGGAAGTGGCTCCTTTTAGCCTGGCAGCTATATATCCAATTTCGCAAAACTTAACATCCTTGAACTTAAGCTATGCTGCAGGCATTCAGAGCAGTGAGCTGATTAAACTCATTCGCCATTGTGGGAAACTACAGCGCTTATGGATAATGGATTGCATTGGTGACAAAGGACTAGGTGTTGTAGCTAGTTCATGTAAAGATTTGGAAGAATTGAGGGTTTTTCCCTCAGCTCCCTTTGGAAATCATGCAGCTGTTACAGAAAAAGGACTGGTAGCAATATCGATGGGATGCCCCAAGCTTCACTCATTACTCTACTTCTGTCACCAGATGACTAATGCAGCTCTCATAACAGTGGCTAAGAACTGCCCGAATTTTATCCGATTTAGGTTATGTATTCTTGATGCAACAAAACCTGACCCTGATACTATGCAGCCACTCGATGAAGGTTTCGGGGCGATCGTGCAGTCATGCAAGCGACTGAGACGGTTATCACTCTCAGGGAAGTTGACTGACCAGGTCTTCCTTTACATCGGAATGTATGCTGATCAGCTTGAAATGTTGTCTATAGCATTTGCTGGTGAGAGTGACAAGGGAATGCTCTATGTATTGAACGGATGCAAAAAGCTTCGCAAGCTTGAGATGAGAGACTGTCCTTTTGGCGACTCGGCTCTTCTGACAGACATAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCGTGCGAAGTGACTGTAGGAGCGTGCAAGACACTAGCTAAGAAGATGCCGAGGCTGAATGTTGAGATCTTCAATGAAAGTGAACAAGAAGATTGTGATATGGAAGATGAGCAGAGAGTGGAGAAGATGTATTTGTATCGCACAGTGGCTGGGAAAAGGAACGATGCACCAGAATATGTATGGACTTTATAG 1716 0.4178 MNYFPDEVIEHVFDYVVSHSDRNALSLVCKSWCRIERFTRQRVFIGNCYSISPERLVQRFPSLKSLTLKGKPHFADFSLVPHGWGGFVYPWIEALAKSKVGLEELRLKRMVVSDDSLELLSRSFMDFKSLVLVSCEGFTTDGLAAVAANCRSLRELDLQENEVEDHKGQWLSCFPESCTSLVSLNFACLKGEINLGALERLVARSPNLKSLRLNRSVPVDALQKILMRAPQLVDLGIGSFFHDLNSDTYAKLKATILKCKSITSLSGFLEVAPFSLAAIYPISQNLTSLNLSYAAGIQSSELIKLIRHCGKLQRLWIMDCIGDKGLGVVASSCKDLEELRVFPSAPFGNHAAVTEKGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCKRLRRLSLSGKLTDQVFLYIGMYADQLEMLSIAFAGESDKGMLYVLNGCKKLRKLEMRDCPFGDSALLTDIGKYETMRSLWMSSCEVTVGACKTLAKKMPRLNVEIFNESEQEDCDMEDEQRVEKMYLYRTVAGKRNDAPEYVWTL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01770 571 Pfam F-box 2 41 IPR041567 -
Car03g01770 571 SMART LRR_CC_2 124 149 IPR006553 -
Car03g01770 571 SMART LRR_CC_2 425 448 IPR006553 -
Car03g01770 571 SMART LRR_CC_2 99 123 IPR006553 -
Car03g01770 571 SMART LRR_CC_2 309 332 IPR006553 -
Car03g01770 571 SMART LRR_CC_2 365 389 IPR006553 -
Car03g01770 571 SMART LRR_CC_2 474 499 IPR006553 -
Car03g01770 571 Pfam Leucine Rich repeat 149 165 IPR001611 GO:0005515
Car03g01770 571 Gene3D Ribonuclease Inhibitor 41 571 IPR032675 -
Car03g01770 571 Gene3D - 1 40 - -
Car03g01770 571 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 2 568 - -
Car03g01770 571 SUPERFAMILY RNI-like 15 547 - -
Car03g01770 571 Pfam Transport inhibitor response 1 protein domain 61 107 IPR041101 -
Car03g01770 571 PANTHER PROTEIN AUXIN SIGNALING F-BOX 3 2 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01770 Car-Chr3 63575064 63578942 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01770 - - gmx:100812516 1024.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01770 03 63575064 63578942 Car03g01770 03 63575064 63578942 ECH