Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01557 ATGTCTATAAGTGGTTTAATTTCCAACAGAAACTTCTCTTCTTTCACTGCCTCAGAAAATGTATATCAATTGAGAAAGCATCAATCACTTCAAAGAGGGAGCATTTCTGGTTTGCAACATGGTGGCCAAATTGCAAAGGACCCTTTTGCAAGATGCCAACATGATCACCATAGAACTAGCCATATTGAACAAAGAACAGTATATGGACTAGGAGTAAGCAAGCTTAGTAAGGTAAATAGAGCCTGTGTTCATTACAGATCAGAGGAGTATGACATTGCAGAAACAAAGGTGGATCCTGTGGCATCTGATGAAGGAACAGGTGAAGCAATTATATTGGAAGGAAATGGTACACCGGTATCGCCTTGGTGGCAGAAGCTTCCCAAGCGCTGGGTTATTGTATTGCTATGTTTTACGGCGTTTCTTCTATGCAACATGGACCGTGTAAATATGAGCATAGCAATACTTCCGATGTCACAAGAGTATAACTGGAATAGTGCAACAGTTGGCCTAATTCAGTCATCTTTTTTCTGGGGCTATCTACTTACTCAGATTCTTGGTGGCATATGGGCAGACAAACTTGGTGGGAAGGTAGTGCTAGGTTTTGGAGTTGTATGGTGGTCAATGGCAACAGTTTTAACACCTATTGCTGCAAGAATTGGACTCCCTTATTTGCTTATTATGCGCGCCTTTATGGGAATTGGTGAGGGTGTAGCCATGCCTGCCATGAATAATATACTATCCAAGTGGATTCCAGTTTCAGAGAGAAGCAGATCACTTTCGCTAGTATATAGCGGCATGTACCTTGGTTCTGTGGTAGGCTTGGCATTCTCACCTATGCTAATACAAAATTTTGGGTGGGCATCAGTTTTTTACTCATTTGGATCCCTTGGAAGTATCTGGTTTGCCTTTTGGTTGAGAAAAGCATATAGTTCACCAAAAGACGACCCGGATCTTGGGGCAGAGGAAAAAAGGCTCATACTTGAAGGCGGTGTATCAAAAGCACCTGTTTCAGACATTCCTTGGAAATTAATTCTATCAAAACCAGCAGTTTGGGCTCTTATAATCTCTCATTTCTGCCACAATTGGGGGACATTTATTCTATTAACATGGATGCCTACTTACTACAATCAGGTTCTGAAGTTCAACCTCACCGAATCTGGGCTCTTATGTGTTCTTCCGTGGTTAACCATGGCTATTTTTGCAAATATTGGAGGGTGGATAGCTGACACATTAGTTAGCAAAGGTTTTTCCATAACAACTGTTCGAAAGATCATGCAATCGATTGGGTTTCTAGGTCCTGCCTTTTTTCTGACGCAACTGAGTCATGTCAAAACACCTGCCATGGCAGTATTGTGCATGGCATGCAGTCAGGGATCTGATGCATTCTCACAATCTGGTCTTTATTCCAATCACCAAGACATTGGACCACGCTATGCTGTAAGTCATTGCTTCCTAATTTACATACCTCGACAAGTAAACTGTCACATATAA 1491 0.4172 MSISGLISNRNFSSFTASENVYQLRKHQSLQRGSISGLQHGGQIAKDPFARCQHDHHRTSHIEQRTVYGLGVSKLSKVNRACVHYRSEEYDIAETKVDPVASDEGTGEAIILEGNGTPVSPWWQKLPKRWVIVLLCFTAFLLCNMDRVNMSIAILPMSQEYNWNSATVGLIQSSFFWGYLLTQILGGIWADKLGGKVVLGFGVVWWSMATVLTPIAARIGLPYLLIMRAFMGIGEGVAMPAMNNILSKWIPVSERSRSLSLVYSGMYLGSVVGLAFSPMLIQNFGWASVFYSFGSLGSIWFAFWLRKAYSSPKDDPDLGAEEKRLILEGGVSKAPVSDIPWKLILSKPAVWALIISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVSKGFSITTVRKIMQSIGFLGPAFFLTQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAVSHCFLIYIPRQVNCHI 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01557 496 Gene3D MFS general substrate transporter like domains 127 316 IPR036259 -
Car03g01557 496 ProSiteProfiles Major facilitator superfamily (MFS) profile. 132 496 IPR020846 GO:0022857
Car03g01557 496 Pfam Major Facilitator Superfamily 136 476 IPR011701 GO:0022857|GO:0055085
Car03g01557 496 SUPERFAMILY MFS general substrate transporter 118 479 IPR036259 -
Car03g01557 496 Gene3D MFS general substrate transporter like domains 336 481 IPR036259 -
Car03g01557 496 PANTHER ANION TRANSPORTER 4 29 479 - -
Car03g01557 496 PANTHER SOLUTE CARRIER FAMILY 17 29 479 - -
Car03g01557 496 CDD MFS_SLC17A9_like 133 481 IPR044777 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01557 Car-Chr3 61241045 61246936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01557 1 479 Organic Solute Cotransporters AT4G00370 73.306 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01557 K08193 - gmx:100784401 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01557 03 61241045 61246936 Car07g02760 07 52955365 52961589 PCT