Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01555 ATGGTTACATTTGGAGTttctacttatgctgtcttcttcttcttcctctctgtgttcatgctttttcttACTATGAGTTTTGGTGGAGACATAGTACACCCTGATAATATTGCTCCCAAGAGTCCTGGATGTGACAACAACTTTGTTCTGGTTAAAATCCCAATTTGGATTGATGGTGTGGAAAGTGACGAGTATGTTGGTGTTGGTGCAAGATTTGGCCCTACATTGGAATCGAAAGAAAAGCGTGCTAACCATACTAGAGTTGCCATTGCAGACCCTCCTGATTGTTGTAGCAAACCTAAAAATAAGCTCACTGGCGAGATCATTTTGGTGCACCGAGGACAGTGTAGTTTCACAACCAAGGCAAATATAGCTGAAGAAGCTGGTGCTTCAGCCATCCTGATTATAAATAACCGTGCAGAACTTTTCAAGATGGTTTGTGAAGAGAATGAAACTGATGTTGATATTGGAATACCTTCTGTCATGCTTCCACAAGATGCTGGTGAAACCTTGGAAAAATATATACATAACAAGTCCACAGTGTCTGTGCAGTTATACTCTCCACTGCGTACAACGGTCGATATTGCAGAAGTATTTCTATGGCTTATGGCTGTTGGTACAATTCTGTGTGCTTCTTATTGGTCTGCTTGGACTGCCAGAGAGGGTGCTATCGAGCGAGAGAAGCTATTAAAGGATGATTCAGATGAGTATCTAAATAATACAGATAATGCTGGTTCCAGTGGTTATCTGGAAATAAGTACTGTGGCAGCAGTTTTGTTCGTTGTGATCGCTTCATGTTTCTTGCTTATGCTTTACAAACTAATGGCATCCTGGTTTGTTGAAGTTCTGGTGGTTCTATTTTGCATTGGTGGGGTTGAGGGACTGCAAACTTGCTTGGTGGCTCTTTTATCATGTTTCAGATGGTCTCAACATGCTGCACAAACATATGTTAAAATACCCTTCTTTGGTGCTGTGTCATATCTCACACTTGCTGTTACTCCCTTCTGCATAGCGTTCGCCGTGCTTTGGGGAGTTAAACGCCATGCATCGTTTGCTTGGATTGGTCAAGACATTCTTGGTATCGCTTTGATAATTACAGTTCTTCAGATTGTCCACATACCAAATCTCAAGGTTGGAACTGTTCTTCTCAGTTGTGCCTTCCTATATGACATTTTCTGGGTGTTTGTATCTAAATGCTGGTTCCATGAGAGTGTGATGATAGTGGTAGCTCGCGGTGATAAGAGTGGAGAAGATGGTATCCCCATGCTGCTCAAGATACCGCGTTTATATGATCCTTGGGGTGGTTACAGTGTCATCGGTTTTGGGGACATAATCTTACCAGGGCTTCTAGTAGCATTTTCATTAAGGTATGATTGGTTAGTGAAGAGGAACCTTCGATCAGGGTACTTCTTGTGGGCAATGGGTGCTTATGGTTTAGGTCTCCTCGTCACATACATAGCTTTGAATTTGATGGATGGACATGGTCAACCAGCTTTGCTGTATATAGTCCCATTTACACTTGGAACCTTTTTGTCATTGGGAAAGAAGAGAGGTGAACTCAAGATTTTATGGACAAGAGGGCAACCAAAAATGCCTTGCCCTCACATCCAAGATGATCATCAACCAATGGGCCAGTGA 1638 0.4109 MVTFGVSTYAVFFFFLSVFMLFLTMSFGGDIVHPDNIAPKSPGCDNNFVLVKIPIWIDGVESDEYVGVGARFGPTLESKEKRANHTRVAIADPPDCCSKPKNKLTGEIILVHRGQCSFTTKANIAEEAGASAILIINNRAELFKMVCEENETDVDIGIPSVMLPQDAGETLEKYIHNKSTVSVQLYSPLRTTVDIAEVFLWLMAVGTILCASYWSAWTAREGAIEREKLLKDDSDEYLNNTDNAGSSGYLEISTVAAVLFVVIASCFLLMLYKLMASWFVEVLVVLFCIGGVEGLQTCLVALLSCFRWSQHAAQTYVKIPFFGAVSYLTLAVTPFCIAFAVLWGVKRHASFAWIGQDILGIALIITVLQIVHIPNLKVGTVLLSCAFLYDIFWVFVSKCWFHESVMIVVARGDKSGEDGIPMLLKIPRLYDPWGGYSVIGFGDIILPGLLVAFSLRYDWLVKRNLRSGYFLWAMGAYGLGLLVTYIALNLMDGHGQPALLYIVPFTLGTFLSLGKKRGELKILWTRGQPKMPCPHIQDDHQPMGQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01555 545 SMART psh_8 248 517 IPR006639 GO:0004190|GO:0016021
Car03g01555 545 PANTHER PA DOMAIN, PRESENILIN/SIGNAL PEPTIDE PEPTIDASE-RELATED 15 542 - -
Car03g01555 545 Pfam Signal peptide peptidase 250 527 IPR007369 GO:0004190|GO:0016021
Car03g01555 545 Gene3D - 51 188 - -
Car03g01555 545 SUPERFAMILY PA domain 103 148 IPR046450 -
Car03g01555 545 Pfam PA domain 94 171 IPR003137 -
Car03g01555 545 PANTHER SIGNAL PEPTIDE PEPTIDASE 15 542 IPR007369 GO:0004190|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01555 Car-Chr3 61223827 61230043 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01555 109 185 Miscellaneous Gene Families AT2G30290 39.759 2.20e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01555 K09597 - gmx:100808921 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01555 03 61223827 61230043 Car07g02757 07 52886277 52893600 PCT