Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01419 ATGGGGAACTGCTTGGCTAAGCATCAGGATAAGGATAATGATTCTGATCAACATGTGGAGTTTGCTGCTGGGAATGTGGTACTTATTACCACAAAAGAATCTTGGGACCAAAAGTTGGAAGAAGCAAGGAAGGATGACAAAATTGTGATTGCAAATTTCAGCGCAGTGTGGTGTGGTCCTTGCAAGATAATTGCGCCATATTACTGCGAGTTGTCTGAGAAATACACATCTATGATGTTCTTATTAGTTGATGTGGATGAACTAACTGACTTTAGCACTTCATGGGACATCAAAGCCACACCAACTTTCTTCTTTCTTAAAGATGGACAACAACTTGACAAACTTGTAGGAGCCAACAAGCCAGAGCTTGAGAAGAAGGTTGTTGCCATTGCTGATTCAGTTCCTCAGAATAATAAGCAGTGA 423 0.409 MGNCLAKHQDKDNDSDQHVEFAAGNVVLITTKESWDQKLEEARKDDKIVIANFSAVWCGPCKIIAPYYCELSEKYTSMMFLLVDVDELTDFSTSWDIKATPTFFFLKDGQQLDKLVGANKPELEKKVVAIADSVPQNNKQ 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01419 140 CDD TRX_family 39 127 - -
Car03g01419 140 Pfam Thioredoxin 27 126 IPR013766 -
Car03g01419 140 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Car03g01419 140 Gene3D Glutaredoxin 1 139 - -
Car03g01419 140 SUPERFAMILY Thioredoxin-like 21 129 IPR036249 -
Car03g01419 140 PANTHER THIOREDOXIN 1 137 - -
Car03g01419 140 PANTHER THIOREDOXIN H9 1 137 - -
Car03g01419 140 PRINTS Thioredoxin family signature 49 57 - -
Car03g01419 140 PRINTS Thioredoxin family signature 57 66 - -
Car03g01419 140 PRINTS Thioredoxin family signature 96 107 - -
Car03g01419 140 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01419 Car-Chr3 59510647 59515423 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01419 K03671 - gmx:100813401 243.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01419 03 59510647 59515423 Car03g01419 03 59510647 59515423 ECH
Car03g01419 03 59510647 59515423 Car07g03431 07 62386737 62390773 PCT