Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01416 ATGGAGAAATTTGGAATATGCATTATTTATTTATTCCTTCTTTTGGTTCTTAATAAACAACTATATTCCAATGCTTTTAGTAGCAGTATGATGGATGAAGAGGCATTAGAGGAAGGCCACAATAATGTAGAAAAATCTATCACAGATCATGGTGACATGTGGGACTTAGAAGATGATGAATGGCAAATGGTGCAAAAGAAAGGAAACCAATTTGTGGTGAACGATCAACCTTTCTATGTAAATGGATTCAACACATACTGGTTGATGGTGTTTGCTGCTGATGAGTCCACCAGAGGCAAAGTCACTGAGGTGTTCAAACAAGCTTCCTCAGTTGGTATGACAGTTTGTAGGACTTGGGCATTCAATGATGGCCAATGGAAGGCCCTACAGAAATCCCCTTCAGTTTATGATGAAGATGTCTTCAAGGCCTTGGACTTTGTGGTAAGTGAAGCAAAGAAATACAAAATAAGGCTGATATTATCATTGGCTAACAATTGGGAAGCATATGGTGGCAAAGCACAATATGTGAAATGGGGCAAAGATGCTGGCCTTAACTTGACCATTGATGATGACTTCTTCTCACATCCAACCCTTAGAAGCTACTACAAGTCCCATGTTAAGACTGTGCTCAATAGAGTTAATACATTGACAAATATCACTTACAAGGAAGATCCTACCATTTTTGCCTGGGAATTGATGAATGAGCCTAGATGCACCTCAGATTCCACAGGTGATAAGTTACAGGACTGGATACAAGAAATGGCATTCCATGTGAAGAAAATTGATCCAAAACACCTAGTAGAGGTTGGACTAGAAGGATTTTATGGACCCTCAACACCTCAGAGACTTCAGTTCAATCCAAATACATATGCTCAACAGGTTGGAACTGATTTTATCAGGAATCATCAGGTTCTTGGTGTGGACTTTGCTTCTGTTCACATGTATGCTGACTCTTGGATTTCAACACAAATTGCTGATACTCATCTCCCATTTGTAAAATCTTGGATGGAAGCTCACATAGAGGATGCAGAAAAGTATCTTGGAATGCCAGTTATTTTTTCCGAGTTTGGTATATCTTCAAAAGATCCTGGCTACAATTCAACATATAGAGACACATTAATAAACACTGTGTATAGTTCCATCCTAAACTCCACAAAGAAAGGAGGGAGTGGAGCTGGAAGCCTTTTGTGGCAGGTCTTTCCTGAAGGAACAGATAATATGGATGATGGTTATGCAATTGTTCTCTCAAAATCACCTTCCACCTCAAGTATTGTTTCCCTTCAATCCTATAGGCTTGGTTTATTCAACTCCTTGTGTTCTTCCAAATGCCAATGGAGTTGTAAGAAGAAGAAAATGTTGGATAAGATACTCTATCATGATGAACTCTAA 1389 0.3895 MEKFGICIIYLFLLLVLNKQLYSNAFSSSMMDEEALEEGHNNVEKSITDHGDMWDLEDDEWQMVQKKGNQFVVNDQPFYVNGFNTYWLMVFAADESTRGKVTEVFKQASSVGMTVCRTWAFNDGQWKALQKSPSVYDEDVFKALDFVVSEAKKYKIRLILSLANNWEAYGGKAQYVKWGKDAGLNLTIDDDFFSHPTLRSYYKSHVKTVLNRVNTLTNITYKEDPTIFAWELMNEPRCTSDSTGDKLQDWIQEMAFHVKKIDPKHLVEVGLEGFYGPSTPQRLQFNPNTYAQQVGTDFIRNHQVLGVDFASVHMYADSWISTQIADTHLPFVKSWMEAHIEDAEKYLGMPVIFSEFGISSKDPGYNSTYRDTLINTVYSSILNSTKKGGSGAGSLLWQVFPEGTDNMDDGYAIVLSKSPSTSSIVSLQSYRLGLFNSLCSSKCQWSCKKKKMLDKILYHDEL 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01416 462 PANTHER - 8 462 IPR045053 GO:0004553
Car03g01416 462 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 8 462 - -
Car03g01416 462 SUPERFAMILY (Trans)glycosidases 64 420 IPR017853 -
Car03g01416 462 Gene3D Glycosidases 61 435 - -
Car03g01416 462 Pfam Cellulase (glycosyl hydrolase family 5) 75 377 IPR001547 GO:0004553|GO:0071704
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01416 Car-Chr3 59489948 59493445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01416 58 462 Glycoside Hydrolase AT5G01930 72.236 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01416 K19355 - gmx:100805357 820.076
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01416 03 59489948 59493445 Car03g01416 03 59489948 59493445 ECH
Car03g01416 03 59489948 59493445 Car07g03429 07 62380065 62382459 PCT