Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01360 ATGCCTATTTCCAGGTACAACATTCGAAGCGCGCACGTGTTGGCGGATCCGGAGCTTCACCGTGCCGCCGATAAGGATGACTCTGAAGCTCTTCTTGAAGCCGTAGCCATGAGTGGACTCGTCGGCTTCTTGCGCCAGCTCGGTGACCTCGCTCAATTTGCTGCCGAGTTGTTCCACGACTTGCATGAAGAAGTAATGGCTACTGCTGAAAGAGGCCACAGTCTTATGTCTCGTGTCCAACAACTTGAGGCTGAAATTCCTCCACTTGAGAAAGCGTTTTTGTCACAAACTCATCATTCATCTTTTTTCACAAATGGAGGGATTGACTGGTGTCCTAATCTTCGATCTGAACAAAATCTTGTTACACGTGGAGATTTACCAAGATTTATAATGGATTCTTATGAAGAATGTCGTGGTCCACCTAGACTTTTCCTTCTCGACAAATTTGATGTGGCTGGTGCTGGGGCATGTTTGAAGCGTTATACTGATCCATCAGTCTTTAAAGCAGAGCCTGCGTCCTCTGTAACCACAACAGTAGAAGTTCACAGGCAAAAGAAAATTCGTAAAGTTAGGCAAAAGAAAGGAGAATGGCTGAGGGATGGTGAAACCTCTGAAGTTGTACAATCACATTCAAAACTACATCAGTTATTTCTTGAGGAGCGTATTGAGAATGCTTATAGTGATCCTGCTCGTCTTGTGAAGTTGAAAAAAAGACAATTTGATGGATCTGCAGTTGAAGCAAAATCTGGTAAAAGTTACATGGAGAAAATTCTGGAAATGCCCTCACCTGATCATAAAATGGTTTGTGAAACTTCAATCACTTCACTACCTGTGAAATTTATGTCAGATAACACTAGTGAAACTGGAATTAGTATACTTGAAATCAATGGCAGTTCACCTAGGAGAAAGTCTATGGGAAATGGAAATTCTCATTCTTCATCAAATAAGCAGGATTTAGAACCGAATTCGTGCTCAGAAATGGACGGGAAGACAGATGGGTTTCTTGTGGAGGAGCCTGAACAAATCTCTTCTGGTGGAACAGATAAAATGTCTTCTAAGCATCTCAAGGTACCTGCTGAAACAGAACTGGTGGATAATGATGAACAAAAGAAAATAGAATGCAGCTTAGATGAATACCATTCTGATGACGCAGCTAGTGAGGTTGATGATTATATGGATGCATTAGCTACCATGGACTCAGAGTTGGAAATAGACAATGATTGTAGACCTAAGAAAAGCTTCTTGAATGTTCAAAAGGTAACTGATTCAAATGGTGAAGAACATCAACTGCAAGCTCAATTTTCAGATTCTGAATCATTTGGAGACTCATCATTATCTGAGGAAATTGGTTCATTTGAACAAAATACACTTGAGGAACATAATGAAGCGCAAGCCCGGCTGCTAGATTCTCGGTCAGNNNNNNNNNNATAG 1431 0.4109 MPISRYNIRSAHVLADPELHRAADKDDSEALLEAVAMSGLVGFLRQLGDLAQFAAELFHDLHEEVMATAERGHSLMSRVQQLEAEIPPLEKAFLSQTHHSSFFTNGGIDWCPNLRSEQNLVTRGDLPRFIMDSYEECRGPPRLFLLDKFDVAGAGACLKRYTDPSVFKAEPASSVTTTVEVHRQKKIRKVRQKKGEWLRDGETSEVVQSHSKLHQLFLEERIENAYSDPARLVKLKKRQFDGSAVEAKSGKSYMEKILEMPSPDHKMVCETSITSLPVKFMSDNTSETGISILEINGSSPRRKSMGNGNSHSSSNKQDLEPNSCSEMDGKTDGFLVEEPEQISSGGTDKMSSKHLKVPAETELVDNDEQKKIECSLDEYHSDDAASEVDDYMDALATMDSELEIDNDCRPKKSFLNVQKVTDSNGEEHQLQAQFSDSESFGDSSLSEEIGSFEQNTLEEHNEAQARLLDSRSXXXX 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01360 476 MobiDBLite consensus disorder prediction 295 333 - -
Car03g01360 476 Gene3D - 104 252 - -
Car03g01360 476 PANTHER WASP-1 1 473 IPR028288 GO:0005856|GO:0030036
Car03g01360 476 MobiDBLite consensus disorder prediction 422 476 - -
Car03g01360 476 Gene3D - 1 90 - -
Car03g01360 476 PANTHER WH2 DOMAIN, SCAR/WAVE FAMILY PROTEIN-RELATED 1 473 - -
Car03g01360 476 MobiDBLite consensus disorder prediction 295 324 - -
Car03g01360 476 MobiDBLite consensus disorder prediction 422 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01360 Car-Chr3 58592479 58595620 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01360 - - cam:101512913 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01360 03 58592479 58595620 Car03g01360 03 58592479 58595620 ECH
Car03g01360 03 58592479 58595620 Car06g02434 06 26919654 26927027 PCT