Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01273 ATGGGCGATTTCAACCTCGCCCTCGTGATCGTAGCAATAGTGGTTTGTGTGATCGTGTTCCTTGTCAATGTGTACCTTCTCGTGAACTACCAGCATCCTGATGACGTTAACCAGGCTTACTTCCCCAAATTCGTCGTCGTTTTGGGACTATCGGTGGCCGCAATCTCTATACTTATGCTTCCCGCCGATGTGGCGAACCGGCAAGCTTGCCGGCACGCTATTTACAATGGCGCGTGTAATCTCACGCTTCCGATGAAAGACCTTTGGCTCGCTGTTTACATCATCGATGCCATTCTCGTCTTCTTCATCATTCCGTTCGCAATGTTCTACTACGAAGGCGACCAGGACAAGAGTATTGGTAAAAGGATTAAGAGTGCATTGTGTTGGGTGGTGACGACTGCTATAGTGTGCGCTCTTGTTCTGGGTATTTTGTATGGGGTTGTTGGTAAGGTGGATTTTACGGTTAGGCATCTTTCTTCATCAACAAGTTCATTTCCTAGCTCATGGGGACTCAGTAGTGGTCAACAATGTGTTGGAAGTGGTGCCCATCAGTGCTCAGCATACTCTGCTAGCCCTTCATCAGAGAAAACATGGACTATGCGTTCAACCTTTCCAGAATATGTTGTAGCTCTTGCTACTATTGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATTGCTTGTCTTCCGCTAGGACTTATATTTTCATTTATCCGACGTCCAAAGGCTGTTATCACTCGCTCACAGTATATCAAGGAAGCAACTGAACTTGGTAAAAAAGCAAAAGAGTTGAAAAAAGCAGCTGAGGCACTCCATCAGGAAGAAAGAAGTGGTGCAAAGGGTAGAAAATATCGTAAAAATGTAAAGGAAGTAGAGAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAACTTCTTGAAGAGATGTATCCACAAGGGGAAAAGGCTGAGACAACATGGGCACTAACAGTTCTTGGTTATCTGGCAAAACTTGTTTTCGGAATTCTAGGGCTGATTGTTTCAGTGGCATGGGTTGCTCATATTATTATCTATCTATTAATTGATCCTCCCCTTTCTCCTTTCCTGAATGAAGTTTTCATCAAGCTAGATGATGTCTGGGGTCTGCTTGGCACAGCTGCGTTTGCATTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGTGCCACGATGCTTGGTTTGAGACTAGTTTTCATCACTATACATCCCATGAAGTGGGGAGCAACTCTCATGAACTCTTTTCTGTTTAATGTGGGCCTTATCCTTCTTTGTTCCATTAGCGTGATTCAGTTTTGCTCCACTGCATTTGCCTACTATGCCCAAGCAACTGCTGCCCAGGAAATATTTGGTCACACTTTGGAGTCTCTTCGTGGAATTAAATATTTGTACAAGTACAATGTATTTCAAATTGCATTTGTTGTTTTGGCCGGATTGACCTTTGTGTATTATGCTGCCTTTGGATGGAGAAGAAAAAAGCCTAGCGGCAGGTTCCAATTGTCTACATGA 1530 0.4353 MGDFNLALVIVAIVVCVIVFLVNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAVYIIDAILVFFIIPFAMFYYEGDQDKSIGKRIKSALCWVVTTAIVCALVLGILYGVVGKVDFTVRHLSSSTSSFPSSWGLSSGQQCVGSGAHQCSAYSASPSSEKTWTMRSTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKAKELKKAAEALHQEERSGAKGRKYRKNVKEVEKELFQLEEDVKLLEEMYPQGEKAETTWALTVLGYLAKLVFGILGLIVSVAWVAHIIIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGATMLGLRLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGIKYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01273 509 PANTHER BNAC05G43630D PROTEIN 1 508 - -
Car03g01273 509 Coils Coil 283 310 - -
Car03g01273 509 Coils Coil 249 276 - -
Car03g01273 509 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 508 - -
Car03g01273 509 Pfam LMBR1-like membrane protein 277 487 IPR006876 -
Car03g01273 509 Pfam LMBR1-like membrane protein 9 275 IPR006876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01273 Car-Chr3 57223318 57228687 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01273 K14617 - gmx:100816750 901.353
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01273 03 57223318 57228687 Car06g02514 06 29259792 29266532 PCT