Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g01218 ATGTCTACATTTTTCACTTCCCACCACTTCACTATCTTAACCCTTTTCATCTTATTCCTCAAAATCCAATCTTTTGATCCTGTTTCATCATTTTCCTTCACAGATTTTGGAAAAGATCCAAGATTTAAGTCAATTGTAGGACTTTATGGCAATGCAAAGGTTGTCAATGGAGGTTCTGAAGTTCTTCTATCTGGGTATGAGAATTCAGGAAGTGGGAAAATCATGTACAAGAAATCCATCAAGCTTGTTGAAGGTGGTGAACCAAAGACATTAGTAtcattttcaacttacttttcattttcaatgtctttGGGTGATGGGAATGGCTTGGCTTTTGTTATGGTTCCAAGTGGTTTTCAAGGTGAGTTTTTTGATAATAGTTCATCTGGTTTATCTTTTGGTTTGAAGGAAAAGGAATCTAAGGTTATTGGTGTTAAGTTTATTGCTTCTAGAGATGATGGAAATGAGAGTTCTGCTAGTTTTAGTGTGGCTATTAATGTTGGTAGTTCTATTCATGTTAAAACAATCAATATCTCTTCTGTTAATACGGTTATAAGAAATGGTGGAAAATTGCATGCTTGGATTGATTATGATTCAAATTCGAGGCGTTTGGAAGTTAGGTTGAGTCGATATGGTCATTCGAAGCCGGTCGATCCATTGCTCTGGCAAACAATTAATTTCTTTAATTTGTGGAAACCTGAAGAGATGTTTGCAGGGTTTACTTCAATGAAGGGGAAAACCTCTCAAGCATGTTTTCTCTATTCATGGAGCTTTATTGTAAGGCATTTTCCACATTCGGTGCATTCAGAGCCGCAAGATCCAAATGTCTTTGTTGCTAAGAACACTGAAAGTTATTCACCTCCAGTAACTGTGAAACCAAGGAGTGATTGTCTTTTAAGAATTCTTGCTGCAATGATATTTGGTACTGTATGTGGAGCATTGTCAGCATTCACTGTGCTTTATTTGTGGACAATGTTCGGTAATAGGCGTCCTGTGGTGCCGGAGGAGTGTGTTATGCAGCCTGTAGATTTTGAGTACAAGAAAGTGAACATTGTTGTAGATAAACCCCTTAAAGATGCTAAGATTTTGCTTTGCTGTAGTTTGGCACTTGATATGTGCGGCTACTGCAGAAGATACTTCTATCAACAGTATAGGATTCGTCAAATTTATTTACGTACAATGACGATCCAACACCTATTGCAACTCCACCCCATCACAAACACTAGCCCTAGTTTCAATGTCAGCTCAAGTACCAACGTGAGCCCAAAAGCATATAGCACTAGCCCTTCCAATGGTTGCATACAAAATTACGAGGCAAATTATATTCAATGA 1332 0.3716 MSTFFTSHHFTILTLFILFLKIQSFDPVSSFSFTDFGKDPRFKSIVGLYGNAKVVNGGSEVLLSGYENSGSGKIMYKKSIKLVEGGEPKTLVSFSTYFSFSMSLGDGNGLAFVMVPSGFQGEFFDNSSSGLSFGLKEKESKVIGVKFIASRDDGNESSASFSVAINVGSSIHVKTINISSVNTVIRNGGKLHAWIDYDSNSRRLEVRLSRYGHSKPVDPLLWQTINFFNLWKPEEMFAGFTSMKGKTSQACFLYSWSFIVRHFPHSVHSEPQDPNVFVAKNTESYSPPVTVKPRSDCLLRILAAMIFGTVCGALSAFTVLYLWTMFGNRRPVVPEECVMQPVDFEYKKVNIVVDKPLKDAKILLCCSLALDMCGYCRRYFYQQYRIRQIYLRTMTIQHLLQLHPITNTSPSFNVSSSTNVSPKAYSTSPSNGCIQNYEANYIQ 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g01218 443 Pfam Legume lectin domain 29 265 IPR001220 GO:0030246
Car03g01218 443 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 1 361 - -
Car03g01218 443 Gene3D - 28 261 - -
Car03g01218 443 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 1 361 - -
Car03g01218 443 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 259 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g01218 Car-Chr3 56047774 56050660 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g01218 15 349 Receptor kinase-like Gene Family AT5G60270 23.647 1.15e-13 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g01218 - - gmx:100815991 447.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g01218 03 56047774 56050660 Car03g01218 03 56047774 56050660 ECH
Car03g01218 03 56047774 56050660 Car06g02574 06 30736652 30738421 PCT