Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00918 ATGATATGTAATGCATCAAAAGAAATCAGAGCTTTCTCAACCGCGTTACTGTTCTCCCTCAACATCGCTCTTCCTTCGTTACGCTCTTTTCCTCTTAACCTTAACCTCCATAAACTCCATTCAAATTCCTCCTCTTCTTCGCGTTCCCCTCCTCCTCTTCCCGTTTTCTGGACCATTGGATCCCGGCCCAAATCGGAGAAGCGATTGGGCTCGGGTTGTTGGGTCCAGGTTTTCGGAAACGGCGACGTTTACGAAGGGGAGTTTCATAGAGGAAAGTGTTCAGGGAGCGGTGTTTATTATTATAGTATGAGTGGGAGATATGAAGGGGATTGGATTGATGGAAGATATGATGGGTATGGTGTTGAAACATGGGCGCGTGGAAGCCGTTATCGAGGGCAATATCGTCAAGGATTGAGACATGGATTTGGTGTTTATAGGTTTTATACTGGGGATGTTTATGGTGGTGAATGGTCTAATGGACAGAGTCATGGATGTGGTGTTCATACTTGTGAAGATGGGAGTAGATATGTTGGGGAATTTAAATGGGGTGTTAAACACGGTCTTGGTCACTACCATTTCAGAAACGGAGACACATACTCGGGGGAGTACTTTGCGGATAAGATGCATGGATTTGGAGTATATCGTTTTGCAAATGGTCATCGATATGAAGGAGCCTGGCATGAGGGAAGAAGGCAAGGACTTGGAATGTATACATTTAGAAATGGCGAAACCCAATCCGGTCACTGGCAAAATGGAGTCCTTGACATTCCAAGCACGCAGAACACCACTTACCCAGTTTCTCCTGTTGGTGTCAATCATTCCAAAGTACTCAATGCAGTGCAGGAAGCAAGACGAGCGGGAGAGAAAGCTTATGATTTGTCGAAGGTAGATGAAAGGGTAAACAGAGCAGTAGCAGCTGCTAATAGAGCAGCCAATGCAGCTAGAGTAGCTGCTGTCAAAGCGGTACAAAAGCAAATGCATCATCACGTCAACAATGAAAGTTTCCCAATACCTGTTATGTAA 1023 0.4516 MICNASKEIRAFSTALLFSLNIALPSLRSFPLNLNLHKLHSNSSSSSRSPPPLPVFWTIGSRPKSEKRLGSGCWVQVFGNGDVYEGEFHRGKCSGSGVYYYSMSGRYEGDWIDGRYDGYGVETWARGSRYRGQYRQGLRHGFGVYRFYTGDVYGGEWSNGQSHGCGVHTCEDGSRYVGEFKWGVKHGLGHYHFRNGDTYSGEYFADKMHGFGVYRFANGHRYEGAWHEGRRQGLGMYTFRNGETQSGHWQNGVLDIPSTQNTTYPVSPVGVNHSKVLNAVQEARRAGEKAYDLSKVDERVNRAVAAANRAANAARVAAVKAVQKQMHHHVNNESFPIPVM 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00918 340 PANTHER - 9 331 - -
Car03g00918 340 SMART morn 82 103 IPR003409 -
Car03g00918 340 SMART morn 220 241 IPR003409 -
Car03g00918 340 SMART morn 151 172 IPR003409 -
Car03g00918 340 SMART morn 105 126 IPR003409 -
Car03g00918 340 SMART morn 128 149 IPR003409 -
Car03g00918 340 SMART morn 174 195 IPR003409 -
Car03g00918 340 SMART morn 197 218 IPR003409 -
Car03g00918 340 Gene3D - 159 204 - -
Car03g00918 340 Gene3D - 114 158 - -
Car03g00918 340 Gene3D - 64 113 - -
Car03g00918 340 Gene3D - 205 270 - -
Car03g00918 340 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 149 252 - -
Car03g00918 340 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED 9 331 - -
Car03g00918 340 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 78 183 - -
Car03g00918 340 Pfam MORN repeat 130 152 IPR003409 -
Car03g00918 340 Pfam MORN repeat 222 243 IPR003409 -
Car03g00918 340 Pfam MORN repeat 176 198 IPR003409 -
Car03g00918 340 Pfam MORN repeat 199 221 IPR003409 -
Car03g00918 340 Pfam MORN repeat 107 129 IPR003409 -
Car03g00918 340 Pfam MORN repeat 155 175 IPR003409 -
Car03g00918 340 Pfam MORN repeat 84 104 IPR003409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00918 Car-Chr3 48518089 48525881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00918 76 264 Acyl Lipid Metabolism Gene Families AT2G41210 34.921 2.28e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00918 - - zju:107403351 556.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g03347 07 61552366 61555999 Car03g00918 03 48518089 48525881 PCT