Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00886 ATGGCAAAAACAACTCACATAGCTGTTATTCCAAGTCCTGGTTTCAGCCACCTAGTCCCAATACTAGAATTCACAAAACGTTTAGTCACAAACCACCCAAATTTTCACATCACTTGCATCATTCCCTCACTTGGGTCACCCCCAAATTCCTCAAAATCATACCTCCAAACAATTCCACCAAACATAAACTCAATCTTTCTTCCACCAATCAACAAACATGACTTACCTCAAGGAGCATACCCAGGAGTCATTATTCAACTCACTGTTACTCTCTCTTTACCATCAATTCATCAAGCTTTGAAATCATTGAATTCAAAAGCACCTTTAGTTGCTTTGATTGCTGATTCTTTTGCATTTGAAGCACTTGATTTTGCTAAAGAGTTTAACTCTCTGTCTTATCTTTACTTCCCTAGTTCAGCTATGAATCTATCACTTTCTTTACATTTGGTAAAACTTGATGAAGAGGTTTCATGTGAGTATAAAGATTTACAAGAACCTATAAAGTTACAAGGATGTGTGCCAATTCATGGTCGTGATCTTCCAGCTCCAACAAAAATGAGATCAAATGATGCTTACAAAAAGTTTCTTCAACGTGCAAAAAGTATGTATTTTTTTGATGGAATCTTGTGTAATAGCTTCTTGGAATTGGAATCAGGTGCTATAAAGGCATTAGAAGAAAAGGGTCATCATGAAAATGGAAAAAAAATTAGTATTTTTCCTGTTGGGCCTATTACACAAAAAGGGTCATCTGCATCAAGCAATGATGTTGATGAGTTTGAATGTTTAAAATGGTTGAAAAACCAACCACAAAATTCTGTTTTGTATGTTTCATTTGGAAGTGGTGGAACACTTTCTCTAAGGCAAATCAATGAGCTAGCTTATGGTTTAGAATTGAGTGATCAAAGATTCTTGTGGGTTTTGAGAGCACCAAGTGATTCAGTTAGTGCTGATTACTTTGAAGATGCAAATGTTGACCCTTTGAAGTTTTTACCAAAAGGGTTTTTGGAAAGAACCAAAGAGAAAGGTTTGGTTTTGGCATCATGGGCACCTCAAGTTGAAGTACTTAAGCAAAGTTCAGTTGGTGGATTTTTAAGCCATTGTGGTTGGAATTCAATTTTGGAGAGTATTCAAGAGGGGGTGCCAATAGTAGCTTGGCCTTTGTTTGCTGAACAAGCAATGAATGCAGTTATGTTAAGTGATGGTCTTGAAGTGGCAATTAGGTTGAAATTTGAAGATGATGAGATTGTTGAAAAGGAGAAAATTGCAAAGGTTGTTAAGTGCTTAATGGAAGGGGAAGAAGGTAAAGGAATCAGGGAAAGAATGAAAGTTTTAAAAGATGGTGCTGCTAAAGCACTGAAAGATGATGGTTCTTCAATACAAACCCTGTCTTATTTGGCTAATCAATGGGAAAATTTTGGTGGAATTTAG 1428 0.3634 MAKTTHIAVIPSPGFSHLVPILEFTKRLVTNHPNFHITCIIPSLGSPPNSSKSYLQTIPPNINSIFLPPINKHDLPQGAYPGVIIQLTVTLSLPSIHQALKSLNSKAPLVALIADSFAFEALDFAKEFNSLSYLYFPSSAMNLSLSLHLVKLDEEVSCEYKDLQEPIKLQGCVPIHGRDLPAPTKMRSNDAYKKFLQRAKSMYFFDGILCNSFLELESGAIKALEEKGHHENGKKISIFPVGPITQKGSSASSNDVDEFECLKWLKNQPQNSVLYVSFGSGGTLSLRQINELAYGLELSDQRFLWVLRAPSDSVSADYFEDANVDPLKFLPKGFLERTKEKGLVLASWAPQVEVLKQSSVGGFLSHCGWNSILESIQEGVPIVAWPLFAEQAMNAVMLSDGLEVAIRLKFEDDEIVEKEKIAKVVKCLMEGEEGKGIRERMKVLKDGAAKALKDDGSSIQTLSYLANQWENFGGI 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00886 475 PANTHER UDP-GLYCOSYLTRANSFERASE 72B1 1 473 - -
Car03g00886 475 PANTHER GLYCOSYLTRANSFERASE 1 473 - -
Car03g00886 475 ProSitePatterns UDP-glycosyltransferases signature. 348 391 IPR035595 -
Car03g00886 475 Gene3D Glycogen Phosphorylase B; 6 458 - -
Car03g00886 475 CDD GT1_Gtf-like 6 455 IPR002213 GO:0008194
Car03g00886 475 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 261 400 IPR002213 GO:0008194
Car03g00886 475 Gene3D Glycogen Phosphorylase B; 253 453 - -
Car03g00886 475 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00886 Car-Chr3 47282840 47284809 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g00886 2 470 Glycosyltransferase AT1G01420 46.921 2.17e-152 441
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00886 K08237 - gmx:100776274 665.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00886 03 47282840 47284809 Car03g00886 03 47282840 47284809 ECH
Car07g03328 07 61171197 61172836 Car03g00886 03 47282840 47284809 PCT