Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g00564 ATGCCTTCTCTCCCAGAAGAGCCACTTCTTGCTCCAAACCCAGACCGTTTTTGTATGTTCCCAATTGAATACCCTAAAATTTGGGAAATGTACAAAAAAGCCGAAGCCTCATTCTGGACCGCCGAAGAAGTTGATTTATCACAAGATCTTCAACATTGGAACAATTTAACTGACGGCGAACGACACTTTGTATCCCACGTTCTTGCATTTTTCGCCGCATCCGACGGCATCGTTTTAGAGAATCTTGCTGGAAGATTCATGAAAGAAGTTCAAGTTTCAGAGGCGCGTGCTTTTTACGGTTTTCAAATCGCGATTGAGAATATACATTCTGAAATGTATAGTCTCCTTCTTGAAACGTATATAAGCGATTCGGTTGAGAAGAATCGTTTGTTTCATGCTATTGAGACGATTCCTTGTATTCGTAAGAAAGCGGATTGGGCTTTGAAATGGATCGATTCGTCGGATTCGTTTGCTGAAAGAATCGTTGCTTTTGCTTGCGTTGAAGGTATTTTTTTCTCTGGTAGTTTCTGTGCAATTTTTTGGCTTAAAAAACGTGGTTTAATGCCTGGTTTAACTTTTTCAAACGAGCTTATTTCGCGTGACGAAGGACTTCATTGTGATTTTGCTTGTTTGCTTTATTCACTATTGAGGAATAAACTGAGTGAGGAGCGAGTGAAGAAGATTGTGAGTGATGCGGTTGAGATTGAGAGGGAGTTTGTTTGTGACGCGCTTCCGTGCGCGTTGGTCGGGATGAATGGTGATTTGATGAGCCAGTATATTGAGTTCGTTGCCGATAGGTTGTTGGGTGAGCTTGGTTGTGGGAAAGTTTATAATGTTCAGAATCCTTTTGATTGGATGGAGTTGATTTCTCTTCAAGGGAAGACTAACTTTTTTGAGAAGCGCGTTGGGGAATATCAGAAAGCTTCTGTTATGAATAGTTTGACTGCAAATGGTGGTGCTCATGTTTTCAAGTTGGATGAGGATTTTTAG 990 0.4101 MPSLPEEPLLAPNPDRFCMFPIEYPKIWEMYKKAEASFWTAEEVDLSQDLQHWNNLTDGERHFVSHVLAFFAASDGIVLENLAGRFMKEVQVSEARAFYGFQIAIENIHSEMYSLLLETYISDSVEKNRLFHAIETIPCIRKKADWALKWIDSSDSFAERIVAFACVEGIFFSGSFCAIFWLKKRGLMPGLTFSNELISRDEGLHCDFACLLYSLLRNKLSEERVKKIVSDAVEIEREFVCDALPCALVGMNGDLMSQYIEFVADRLLGELGCGKVYNVQNPFDWMELISLQGKTNFFEKRVGEYQKASVMNSLTANGGAHVFKLDEDF 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g00564 329 Pfam Ribonucleotide reductase, small chain 16 282 IPR000358 GO:0009263
Car03g00564 329 PIRSF NrdB 6 316 IPR000358 GO:0009263
Car03g00564 329 Gene3D Ribonucleotide Reductase, subunit A 3 307 IPR012348 GO:0016491
Car03g00564 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 - -
Car03g00564 329 ProSitePatterns Ribonucleotide reductase small subunit signature. 105 121 IPR030475 -
Car03g00564 329 SUPERFAMILY Ferritin-like 5 307 IPR009078 -
Car03g00564 329 CDD RNRR2 17 291 IPR033909 GO:0009263
Car03g00564 329 PANTHER RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN 6 329 IPR000358 GO:0009263
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g00564 Car-Chr3 26514223 26515212 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g00564 K10808 - qsu:112005137 622.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g00564 03 26514223 26515212 Car03g00564 03 26514223 26515212 ECH