Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02225 ATGAAGAAGCAACTACCACTTGTTCTATTATCCCTCACACTCATTATATCACTCATTCATTCCACCACCGCCGGTGCCGCCACCAACGGCAACCACAACATCACTCGCATTCTCGCCAAACACCCTGACTTCTCCACTTTCAACCATTACCTCACCGTCACTCACCTCGCCGACGAAATCAACCGCCGTCAAACCATAACAATCCTCGCCATCGACAATGCCGCCATGTCTTCTCTCCTCGACAAACACCTCTCCGTTTCCACTCTCAAAAACGTTCTTTCCCTCCACGTCTTAGTTGACTACTTTGGCGCCAAAAAACTCCACCAAATCACTAACGGAACAACTCTCGTTTCCTCCATGTTTCAAGCTACTGGATCCGCCGCCGGAACCGCTGGATACGTCAACGTCACAAATCTAAAAGGCGGTAAAGTCGGTTTCGCCGCCGAAGACAACGACGGACTCCATTCATTCTACGTTAAATCCGTTCAAGAAATTCCTTACGTCATTTCCGTTCTTCAAATCAGTCAACCTTTAAGCTCCGCCGACGCCGAAGCTCCAACGGCGTCGCCGAGCGATATCGATTTAATCTCAATTATGTCAAAACAAGGTTGCAAAGCTTTTGCAGATTTGTTAAGAGTTTCAAAAGCTCTTCCAACTTTTAAAGAAACTGTAGACGGCGGTTTAACTGTTTTTTGTCCAACAGACAGCGCCGTTAACGGTTTCTCAACAAAATACAAAAACCTAACGGATTCTCAAAAGGTTTCACTTCTGTTATATCACGGAGTTCCCGTTTACCAATCATTACAAATGTTGAAATCAAATAACGGTATCATGAACACGTTAGCAACCGAAGGTGCAAACAAGTATGATTTCACAGTTCAAAATGACGGAGAAGATGTTAACCTTGAAACGAAGGTTAATACTGCGAATATCATTGGAACATTGATAGATCAAGATCCATTTGTAGTGTACAAAATTAGTAAAGTTTTGATGCCACGAGAATTGTTTAAGGGAGTAAAAGAAGATTTAGCACCTGCTGAGTCACCTAAAGCGCCAAAGAAGAAGAAGAAGAGTAAGGCAGCTCCGGCGGAGGATGCAGATTCACCGGCGGATGGACCAGATGCAGATTCAGAATCTGATGATCAGAAAGCTGCTGATGATAATGGAGTGAGTGGATTAAATCAACGGTTCGGATTCATTATGGTGCTTTTTAGTTTGTTTATTGGAGTTTTGGTTCTATAA 1242 0.4356 MKKQLPLVLLSLTLIISLIHSTTAGAATNGNHNITRILAKHPDFSTFNHYLTVTHLADEINRRQTITILAIDNAAMSSLLDKHLSVSTLKNVLSLHVLVDYFGAKKLHQITNGTTLVSSMFQATGSAAGTAGYVNVTNLKGGKVGFAAEDNDGLHSFYVKSVQEIPYVISVLQISQPLSSADAEAPTASPSDIDLISIMSKQGCKAFADLLRVSKALPTFKETVDGGLTVFCPTDSAVNGFSTKYKNLTDSQKVSLLLYHGVPVYQSLQMLKSNNGIMNTLATEGANKYDFTVQNDGEDVNLETKVNTANIIGTLIDQDPFVVYKISKVLMPRELFKGVKEDLAPAESPKAPKKKKKSKAAPAEDADSPADGPDADSESDDQKAADDNGVSGLNQRFGFIMVLFSLFIGVLVL 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02225 413 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 2 12 411 - -
Car02g02225 413 SMART fasc_3 67 166 IPR000782 -
Car02g02225 413 SMART fasc_3 229 333 IPR000782 -
Car02g02225 413 MobiDBLite consensus disorder prediction 342 387 - -
Car02g02225 413 SUPERFAMILY FAS1 domain 37 152 IPR036378 -
Car02g02225 413 ProSiteProfiles FAS1/BIgH3 domain profile. 31 173 IPR000782 -
Car02g02225 413 ProSiteProfiles FAS1/BIgH3 domain profile. 191 330 IPR000782 -
Car02g02225 413 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 12 411 IPR033254 -
Car02g02225 413 SUPERFAMILY FAS1 domain 188 333 IPR036378 -
Car02g02225 413 Pfam Fasciclin domain 204 332 IPR000782 -
Car02g02225 413 Pfam Fasciclin domain 42 122 IPR000782 -
Car02g02225 413 Gene3D FAS1 domain 31 168 IPR036378 -
Car02g02225 413 Gene3D FAS1 domain 196 332 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02225 Car-Chr2 52342440 52344313 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02225 - - gmx:100799605 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02225 02 52342440 52344313 Car02g02225 02 52342440 52344313 ECH