Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02224 ATGGAAAGTGAAAAGATTGAAGTAATTAGTGCGGAAGAGGATAAACACGGAGGAGTTATTCTGACCGTTAACAAGTCTATGGATTCTCTTTTCTTTGCTTCTAAATTGAAAGCTTCAATGTCTCATTGGAAGCAACAGGGAAAGAAGGGAATGTGGATCAATTTGCCCATACAACATTCAAATCTTGTTGATTCTGCTGTCAAGGCTGGATTTAGGTATCACCATGCTGAGCCAGATTACTTGATGCTTGTATATTGGATCCCTGATACCCCTGATACCCTTCCTGCAAATGCTTCACATCGTGTGGGCGTTGGTGCTTTCGTTATCAACAGCAAGAGGGAGGTGCTTGTGGTTCAGGAAAGCGATGGTAGATTTGGAGGCACAGGCGTATGGAAGATGCCTACAGGAGCTGTTGATGAAGGTGAGGATATCTGCAATGCTATAGTTAGAGAAGTGAAGGAAGAGACAGGGATAGAGACCGAGTTTGTTGAAGTTTTAGCATTCAGGCAAAGCCATGAATCTTTCTTCCAGAAATCAGATTTGTTCTTTGTTTGTATGTTGCAACCTCGATCCTTTGACATTCAGAGTCAGGCCTCAGAAATTGAAGCAGCTAAGTGGATGCCAGTTGAAGATTATGCAGCCCAACCTTTTGTGCAAGAAAATGAGCTCTTTGATTTTATAGCGAAAATATGCTTAACAAAGTTGGATGGCAACTACACTGGTTTTTCTAGCATATGTACCAGTACATCTTCTGGCAAAAGAACATATCTGTATTTTAACAACGATACTATTGCTAGCCACTTGTTAGCTTCCAAACATGAGTAA 825 0.4109 MESEKIEVISAEEDKHGGVILTVNKSMDSLFFASKLKASMSHWKQQGKKGMWINLPIQHSNLVDSAVKAGFRYHHAEPDYLMLVYWIPDTPDTLPANASHRVGVGAFVINSKREVLVVQESDGRFGGTGVWKMPTGAVDEGEDICNAIVREVKEETGIETEFVEVLAFRQSHESFFQKSDLFFVCMLQPRSFDIQSQASEIEAAKWMPVEDYAAQPFVQENELFDFIAKICLTKLDGNYTGFSSICTSTSSGKRTYLYFNNDTIASHLLASKHE 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02224 274 ProSitePatterns Nudix box signature. 136 157 IPR020084 GO:0016787
Car02g02224 274 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 101 235 - -
Car02g02224 274 PANTHER NUDIX HYDROLASE RELATED 3 270 IPR003293 -
Car02g02224 274 SUPERFAMILY Nudix 68 224 IPR015797 -
Car02g02224 274 Pfam NUDIX domain 100 220 IPR000086 -
Car02g02224 274 Gene3D - 6 92 - -
Car02g02224 274 ProSiteProfiles Nudix hydrolase domain profile. 99 231 IPR000086 -
Car02g02224 274 CDD Nudix_Hydrolase_12 100 231 - -
Car02g02224 274 Pfam Nudix hydrolase domain 11 87 IPR040618 -
Car02g02224 274 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 59 77 IPR003293 -
Car02g02224 274 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 81 97 IPR003293 -
Car02g02224 274 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 97 115 IPR003293 -
Car02g02224 274 PRINTS Anti-sense to fibroblast growth factor protein GFG signature 185 209 IPR003293 -
Car02g02224 274 PANTHER NUDIX FAMILY HYDROLASE 3 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02224 Car-Chr2 52335673 52340561 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02224 - - gmx:100818821 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02224 02 52335673 52340561 Car02g02224 02 52335673 52340561 ECH