Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02172 ATGGAGACGAAAAAGAATGAATCAGATAATAAATGGATGACAGGAGATGCAATTGCATTTTCCCATCTAAGTGGAAAAGTTATTTACATCCCAAAGAATGTACCTTTTACAGTGAACTTGAATTCCCTAGAATATGAAGTTTTTACATTAGTCCCTGTGAAGGAATTAAGAGATGGTGTGAAATTTGCTCCTATTGGTTTAATTAATTCAAGAGGGGTTGTGAATGTTACAGAATGGAATTGTTGTGGACCTAATGCAAGTACAGATGTTACCAATGTTAACATGAAAGTTTTTGGATGTGGCAAATATGCTGCATATTCATCAGTTAGGCCTAAGTTGATAGCAATTGATTCACATATGGTGGAATTTAGTTATGATCAAGAATCTGGATTGGTCACTATTGAATTGAAAGTACCAGAGAAAACACACAAAACCTTGGTTAAACCCTCAAATTTGCATTCCATTTTTGCAGTGTGGTGTAGAGATACGTACATACATAAAGACATGTTTGGGAGAGCAATTTTAAAGCGCAGCAAAGAAGTGCTTCTGATTCAGAAGCAGCTCAGAGGGAGCAGCAGAATCATCCCTTTCTCTCATCCTTCCACCCATCAATCATTCAAGTTTCTTACCCCTTCCATTTCCTCCCATTTCTTTCGTGCTTTCCGATCTCATCCTATTCCTAAGTTGTGGCTCTCTTATGGTCATCATGTGCAGTTCACGAGGAACTTCTCTAGTGTGGTGTCTGCCGGGGCCAAACATAAGGAGGGGTTGAAGTTGCTTGTGACAGGAGGTTCTCATGCCCAAAAGGTGGTTGGGATTTGGCTCTTTGGATCGGCTGCATGGGTGTTTAGCATGGTGGTACTTGGGGGTTTAACCAGACTAACTAGATCCGGTCTTTCAATGACTGATTGGAAATTCACGGGTGAGTTCCCTCCTTTGTCAGATGAGGCGTGGTTTCAAGAGTTTGAGAAATATCAACAGTCACCTGAATACAAGCGTGTTAACAAAGGGATGACGATTGAAGAATTCAAGTTCATATATTGGATGGAATATGGTCACCGTATGTGGGGGAGAGCACTGGGAATTATGTTTGCTTTACCGTTTTCATATTTTCTTCATAAGGGGTATATTACATTGAGATTAGGACTGAGACTCTCTTCTTTGTTTGCCCTTGGTGCTGGTCAGGGTCTCATTGGCTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCCCCAACTGAATATTCTCAGCCAAGAGTAAGCCCTTACCGTCTTGCCGCTCACCTTACATCAGCATTTGCTATTTACTGCGGTCTGTTTTGGACTGCACTTAATGTTGTTATGCCTGAGCCTCCTGCCGAATCACTGACATGGGTCCGTGGGGCAGCTAAAGTGAGGAGACTTGCATTGCCAGTCAGCCTACTTGTTGGTCTTACTGCTGTCTCTGGTGCATTTGTTGCAGGAAATGATGCTGGGCATGCATTTAATACTTTTCCGAAGATGGGTGATACATGGATCCCTGAAGACATTCTTGAAATGAAACCTCTGATTCGAAATTTCTTTGAGAATACAGCGACTGTACAGCTCAATCACCGGATCCTTGCAACTGCAACTCTAATTTCTGTGAGTGCCTTATGGTTGTCAACAAGAAAACTGGACATACATCCTGCAGTACGGTCTGTGATCGGAAGCGTCTTTGGCATGGCATCTCTTCAGGTTGTCACCTTGGGAGTTTCGACGCTTCTTTCATATGTACCTGTTTCATTGGGTACTGCACATCAGGCTGGGGCCTTAACACTTCTGACGTTTATGTTACTGCTTAATCACACGGTTCGAAGGCCGTCCTTAGCCCTTCTCAAATCTCTGCCTCAGGTTAAGCCTGGCATTGAAGCTCCTTGTCCAATTGGCGATTTTCGGAATCTTCTTTATTTAGTTTGTACATTTGAAGCCTGA 1950 0.4267 METKKNESDNKWMTGDAIAFSHLSGKVIYIPKNVPFTVNLNSLEYEVFTLVPVKELRDGVKFAPIGLINSRGVVNVTEWNCCGPNASTDVTNVNMKVFGCGKYAAYSSVRPKLIAIDSHMVEFSYDQESGLVTIELKVPEKTHKTLVKPSNLHSIFAVWCRDTYIHKDMFGRAILKRSKEVLLIQKQLRGSSRIIPFSHPSTHQSFKFLTPSISSHFFRAFRSHPIPKLWLSYGHHVQFTRNFSSVVSAGAKHKEGLKLLVTGGSHAQKVVGIWLFGSAAWVFSMVVLGGLTRLTRSGLSMTDWKFTGEFPPLSDEAWFQEFEKYQQSPEYKRVNKGMTIEEFKFIYWMEYGHRMWGRALGIMFALPFSYFLHKGYITLRLGLRLSSLFALGAGQGLIGWWMVKSGLEEPPTEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALNVVMPEPPAESLTWVRGAAKVRRLALPVSLLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDILEMKPLIRNFFENTATVQLNHRILATATLISVSALWLSTRKLDIHPAVRSVIGSVFGMASLQVVTLGVSTLLSYVPVSLGTAHQAGALTLLTFMLLLNHTVRRPSLALLKSLPQVKPGIEAPCPIGDFRNLLYLVCTFEA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02172 649 Pfam Raffinose synthase or seed imbibition protein Sip1 6 135 IPR008811 -
Car02g02172 649 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 206 624 IPR023754 GO:0006784|GO:0016020|GO:0016653
Car02g02172 649 Pfam Cytochrome oxidase assembly protein 273 603 IPR003780 GO:0006784|GO:0016021|GO:0016653
Car02g02172 649 Hamap Heme A synthase [ctaA]. 268 613 IPR023754 GO:0006784|GO:0016020|GO:0016653
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02172 Car-Chr2 51922446 51927471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02172 14 141 Glycoside Hydrolase AT1G55740 47.727 7.69e-26 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02172 K02259 - gmx:100786107 721.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02172 02 51922446 51927471 Car02g02172 02 51922446 51927471 ECH