Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02131 ATGGCGCCGGTGGCAGCGAGAAGCGCAGGCGCTGTTGGTATCGGAACTGCCATCTTTCTATCTCTCGTCGCCGCTTATTTCTTCTGCGACCGTCGCAACAATTCATCGAAGAAAAAGAAGAAGAAAATTTCAACTAAAGGAATCGTTGACGCCATTGGTAACACTCCTTTGATTCGAATCAACAGTCTCTCCGACGCCACTGGTTGCGAAATTTTTGGGAAATGCGAGTTTTTGAATCCTGGAGGGAGTGTTAAAGATCGTGTTGCTGTTCAAATTATTGAAGAGGCTTTGGAATCTGGGCAGCTGCGTCGAGGTGGAATAGTTACTGAAGGGAGTGCTGGAAGCACTGCCATTAGCATTGCTACTGTTGCTCCTGCTTATGGATGCAAATGTCATGTGGTTATTCCAGATGATGCTGCCATTGAGAAGTCTCAAATACTTGAAGCACTTGGGGCAACTGTTGAAAGAGTACGGCCAGTATCAATTACTCACAAAGACCATTTTGTCAATATCGCTAGAAGACGGGCATCTGAAGCAAATGAGTTTGCATTAAAGTTTAGAAAATCACATTTGAATGGCACAGACTCGCAGCAAATAAATGGCGGCTTCTTTGCTGATCAGTTTGAGAACCTAGCAAACTTCAGGGCCCATTACGAGGGTACAGGACCCGAGATCTGGGAACAGACGAATGGAAAGTTAGATGCATTTGTTGCAGCAGCAGGCACTGGTGGTACTGTGGCTGGTGTTTCCAAGTTTCTTCAGGAAAAGAATCCAAACATCAAGTGTTACCTTATAGATCCTCCTGGTTCTGGATTGTTTAATAAGGTAACGAGGGGGGTGATGTACACCAAACAGGAGGCGGAAGGACGAAGACTTAAGAATCCATTTGACACTATAACAGAAGGAATTGGAATTAACAGGGTAACAAAGAATTTTGCGGAGGCAAAACTTGATGGGGCATTTAGAGGCACAGACATTGAAGCTGTTGAAATGGCCAGGTTTCTTGTGAAGAATGATGGACTCTTCCTTGGAAGTTCTTCTGCAATGAACTGTGTTGGAGCAGTCAGAATAGCGCAATCAATTGGTCCTGGTCACACAATTGTAACAATTCTTTGTGACAGTGGAATGAGACATTTGAGCAAGTTTTATAATGCTGAATACTTGTCTCAGCTTGGTTTGACACCCAAAGCAACTGGATTAGAGTTCTTGGGTGTCAAATGA 1221 0.4406 MAPVAARSAGAVGIGTAIFLSLVAAYFFCDRRNNSSKKKKKKISTKGIVDAIGNTPLIRINSLSDATGCEIFGKCEFLNPGGSVKDRVAVQIIEEALESGQLRRGGIVTEGSAGSTAISIATVAPAYGCKCHVVIPDDAAIEKSQILEALGATVERVRPVSITHKDHFVNIARRRASEANEFALKFRKSHLNGTDSQQINGGFFADQFENLANFRAHYEGTGPEIWEQTNGKLDAFVAAAGTGGTVAGVSKFLQEKNPNIKCYLIDPPGSGLFNKVTRGVMYTKQEAEGRRLKNPFDTITEGIGINRVTKNFAEAKLDGAFRGTDIEAVEMARFLVKNDGLFLGSSSAMNCVGAVRIAQSIGPGHTIVTILCDSGMRHLSKFYNAEYLSQLGLTPKATGLEFLGVK 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02131 406 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 46 392 IPR036052 -
Car02g02131 406 Pfam Pyridoxal-phosphate dependent enzyme 50 373 IPR001926 -
Car02g02131 406 PANTHER CYSTEINE SYNTHASE-RELATED 32 404 - -
Car02g02131 406 PANTHER CYSTATHIONINE BETA-SYNTHASE 32 404 - -
Car02g02131 406 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 74 92 IPR001216 GO:0006535
Car02g02131 406 Gene3D - 52 379 IPR036052 -
Car02g02131 406 CDD CBS_like 53 380 - -
Car02g02131 406 Gene3D - 82 214 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02131 Car-Chr2 51621665 51624378 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02131 52 380 Miscellaneous Gene Families AT3G04940 30.514 2.94e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02131 K01738 - gmx:100799081 659.448
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02131 02 51621665 51624378 Car02g02131 02 51621665 51624378 ECH