Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02089 ATGTGGACTCCACGCGctctcttctctacactcgctcttctctttcatcttcttcactctgctcGGAGTGATAGATCTCCATGGAACACACTCACCGGAAATCCACCATTGGTTGTAGCACATGGCGGATTTTCAGGAGTTTTTCCTCAGTCTAGTGAAGTTGCCTATAATTTGGCCGTCATGACGAGCGGACCGGAAGTCTCTATATGGTGTGATGTGCAATTAACCAAAGATGAAGTTGGGATTTGCCTTCCAAATGTCATACTTGACAATTCTACTTTCATTTCCTATATTTTCCCAAATAAAAGTACAACTTACAATGTTAATAATGTACCCACCAATGGATATTTTTCTCTGGATTACACCCTCAAGGATTTATCCAATGTCCCCTTAAAACAGGTAGTATACTCTCGGTCACCCGTGTTTGATGGCACTTATATGATTCTTACTGTTGATGATGTAGTCAAATCAGGGGCGCCACAAACACCAGGTTTGTGGTTGAATATTCAGCATGATGCATTCTACGCGCAACACAAGTTGAGCATGAAAAGATTTGTACTTTCAGTATCTAGAAGAGTGCGTGTTAATTATATCTCGTCACCTGAGATTGGTTTTCTGAGAAGTATTAAACCACGCTTAAACCCGAAAAAGACAAAATTTATCTTCAGGTTTCTCGATCAGAATGAAACAGACCCATCAACCAATCAGACTTATGGTTCACTGTTAAAAAATCTTACGTTTATCAAATCGTTTGCTTCCGGAATTCTTGTTCCCAAGGGATACATATGGCCTGTAGATGATAGTCTCTATCTACAACCACATACCTCTTTGGTCTCAGATGCACATAAATTGGGGCTGGAAGTTTTTGCATCAGGTTTTGCAAATGATGCCTCATTTAGCTTTAATTACAGTTACGATCCTCTTGCTGAGTACCTCCAATTCATTGATAATGGTGAATTCTCCGTCGATGGTGTTTTGTCAGATTTTCCCGTAACTCCTTCTGCAGCTATAGGTTGCTTTGCTCACCTTGGCACCAATTCCACGAAAAGAGATAAAACTTTAATTATCTCAAAATGTGGAGCAAGTGGAGATTATCCAGCCTGTACCGACTTAGCATATAACAAGGCCATATTAGATGGTGTGGATGTTCTTGACTGTCCTGTTCAAATGTCAAAGGATGGAATACCATTTTGCTTAAGCTCCGCTGATCTTGGAGAGAGTACCACAGCTGTAAAATCAAGTTTCAGCCGATATGCCATGAGTATCCCTGAGATCAAACCTGGAAATGGCATATTTACATTCAACTTGACGTGGACTGATATAAAAGGCCTGACCCCCTCAATAGTGAACCCTTTTTTTGCAAAATACAGTTTGGTCAGGGATCCAAAATATAAGAATGCTGGGACATTTGTAACATTATCAGATTTCTTGTTGTTGACAAAAAATCAGACTTCTCTATCAGGCGTCTTGATCATTGTTGAGAACGCAGCCTATCTTGCAGAAAAGCAGGGATTAAGTGTGACCGATGCAGTCATCGATGCTTTGAGCAAAGCAGGTTATGATAAACCAGGAAGCCAAAAAGTTTATATTCAATCCACTAATAGCTCTGTACTTTTGAAGTTCAAGGAAAAAACTAGTTATGAGCTTGTCTACAAGATTGACGAGACTGTCGGTGATGTTGCTGACGCAGCCGTTGAGGATATAAAAAGCTTCGCTGGTTCAGTTGTTGTCGACAAGGTCTCTGTATTTCCTCGTGACGTCGCCTTCCTTACCAGCTCTTTAACAAGGACTGTGCCAAAGCTAAAAGCTTCTAACCTCTCAGTTTTCGTGGAAACGTTCAGCAATGAGTTTGTATCTCAGGCATGGGATTTCTTCTCAGATCCAATTGTTGAGATCAACTCATTTATTCAAGAAGCAGGAATCGATGGGGTCATCACAGACTTCCCTAAAACTGCTAATAGATACTCAAGAAACAAATGCTTAAACTTGGGTGATAAGGTACCTCCTTACATGCAACCTGTTCAAGCAGGTAGTCTTTATGGAATTATTCCCTCTGAATCATTGCCTCCAGCTCTAGCTCCACTCCCATCCTTGACTAATTCTGAAGTGGTAGAGCCACCTTTGCCTCCTGTTACTAAAATAGCCCCAGCTTCTAGTCCTGCTGATGGAACCAATTCGCCACACAAAAATGTGCAGCCTAAGGTTACTGTATGCTTCTTGTCCAATGTGGCTGTGTTTGTACTTGTAGCTTCTCTTGTTTTGCTTTGA 2268 0.4012 MWTPRALFSTLALLFHLLHSARSDRSPWNTLTGNPPLVVAHGGFSGVFPQSSEVAYNLAVMTSGPEVSIWCDVQLTKDEVGICLPNVILDNSTFISYIFPNKSTTYNVNNVPTNGYFSLDYTLKDLSNVPLKQVVYSRSPVFDGTYMILTVDDVVKSGAPQTPGLWLNIQHDAFYAQHKLSMKRFVLSVSRRVRVNYISSPEIGFLRSIKPRLNPKKTKFIFRFLDQNETDPSTNQTYGSLLKNLTFIKSFASGILVPKGYIWPVDDSLYLQPHTSLVSDAHKLGLEVFASGFANDASFSFNYSYDPLAEYLQFIDNGEFSVDGVLSDFPVTPSAAIGCFAHLGTNSTKRDKTLIISKCGASGDYPACTDLAYNKAILDGVDVLDCPVQMSKDGIPFCLSSADLGESTTAVKSSFSRYAMSIPEIKPGNGIFTFNLTWTDIKGLTPSIVNPFFAKYSLVRDPKYKNAGTFVTLSDFLLLTKNQTSLSGVLIIVENAAYLAEKQGLSVTDAVIDALSKAGYDKPGSQKVYIQSTNSSVLLKFKEKTSYELVYKIDETVGDVADAAVEDIKSFAGSVVVDKVSVFPRDVAFLTSSLTRTVPKLKASNLSVFVETFSNEFVSQAWDFFSDPIVEINSFIQEAGIDGVITDFPKTANRYSRNKCLNLGDKVPPYMQPVQAGSLYGIIPSESLPPALAPLPSLTNSEVVEPPLPPVTKIAPASSPADGTNSPHKNVQPKVTVCFLSNVAVFVLVASLVLL 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02089 755 ProSiteProfiles GP-PDE domain profile. 353 656 IPR030395 GO:0006629|GO:0008081
Car02g02089 755 CDD GDPD_SHV3_repeat_1 36 336 - -
Car02g02089 755 PANTHER GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE GDPDL3 16 751 - -
Car02g02089 755 Gene3D Phosphatidylinositol (PI) phosphodiesterase 35 335 IPR017946 GO:0006629|GO:0008081
Car02g02089 755 Gene3D Phosphatidylinositol (PI) phosphodiesterase 352 655 IPR017946 GO:0006629|GO:0008081
Car02g02089 755 ProSiteProfiles GP-PDE domain profile. 36 337 IPR030395 GO:0006629|GO:0008081
Car02g02089 755 Pfam Glycerophosphoryl diester phosphodiesterase family 360 651 IPR030395 GO:0006629|GO:0008081
Car02g02089 755 Pfam Glycerophosphoryl diester phosphodiesterase family 71 331 IPR030395 GO:0006629|GO:0008081
Car02g02089 755 SUPERFAMILY PLC-like phosphodiesterases 34 334 IPR017946 GO:0006629|GO:0008081
Car02g02089 755 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 16 751 - -
Car02g02089 755 SUPERFAMILY PLC-like phosphodiesterases 352 655 IPR017946 GO:0006629|GO:0008081
Car02g02089 755 CDD GDPD_SHV3_repeat_2 354 655 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02089 Car-Chr2 51250754 51255952 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02089 11 755 Receptor kinase-like Gene Family AT4G26690 54.545 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02089 - - gmx:100792750 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02089 02 51250754 51255952 Car02g02089 02 51250754 51255952 ECH