Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02087 ATGGCACATTCTAGTGGCAAATCTTTGATGCAGTGGATGGTAGCAGCACTGCTTATTGCTTTGTTGGGTGGTGCTCAAGCTGTTAAAATATGTGACATAGAGTCAAGTCAGCTAAAATTCTGTCGTGCAGCAGTTACCGGTGAAAACCCGCCACCCCCAGATGAAAAATGCTGCGCTGTTATTCGCGGAGCCAATCTTCCTTGCCTCTGCACATACAAGTCTATCCTACCTTCACTTGGAATCAGCGTCAAAGATGCTATGGAATTGCCCGGTAAATGTGGTTCGAAATCGCCTTCGAAATGTCAAGTGAGATGA 315 0.4603 MAHSSGKSLMQWMVAALLIALLGGAQAVKICDIESSQLKFCRAAVTGENPPPPDEKCCAVIRGANLPCLCTYKSILPSLGISVKDAMELPGKCGSKSPSKCQVR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02087 104 CDD nsLTP_like 31 101 IPR044741 -
Car02g02087 104 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 31 102 IPR036312 -
Car02g02087 104 Pfam Probable lipid transfer 25 100 IPR016140 -
Car02g02087 104 Gene3D - 27 101 IPR036312 -
Car02g02087 104 PANTHER LIPID BINDING PROTEIN-RELATED 1 102 IPR039265 GO:0005504|GO:0009627
Car02g02087 104 PANTHER LIPID TRANSFER PROTEIN 1 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02087 Car-Chr2 51243732 51247420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02087 1 102 Acyl Lipid Metabolism Gene Families AT5G55410 38.679 8.05e-23 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02087 - - gmx:100527644 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02087 02 51243732 51247420 Car02g02087 02 51243732 51247420 ECH