Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02078 ATGGCGAACGAGAACGAACCCGCGAAGCTGTTGTTACCATACCTTCAACGCGCCGATGAATTGCAGAAACACGAACCTCTCGTTTCTTATTACTGTCGATTATACGCGATGGAACGTGGCTTGAAGATTCCGCAATCTGAACGCACCAAGACCACTAACGCTCTTCTTGTTTCCCTCATGAAACAGCTCGAAAAGGATAAAAAGTCAGTCCAGTTGGGGCTTGAAGATAATTTGTATCTTGAGGGATTTGCTTTGAATGTGTTTGGAAAAGCAGACAAGCAAGATCGTGCTGGAAGAGCAGATTTGAACACGGCAAAAACATTTTACGCTGCTACCATCTTTTTTGAAATTCTCAATCAATTTGGACCAGTTCAGCCTGATCTGGAGCAGAAACAGAAATATGCAGCATGGAAAGCAGCTGATATAAGAAAGGCTTTGAAAGAAGGAAGGAAGCCCATGGCTGGCCCTCCTGCTGGTGACGAGGACCTGTCAGTTCCAGCGAGTTCTCCTAGCAATAGATATGATATTGGGACTACTGAAACTTCTGCTTCCAATGCTGAATCAGATTCTGATTCAACACATAGTTATCATAACCCTGTCAACTACCAGAATATGCCAAGCATTCATCCTGCACCTAAATTCCATGATACTACTGTTAATGATACTCAATCTTATACACCTGGAGTTTATCCTTCCCAAGACTTCCATCCTTCTCCATCTTCCCAGGATTATCATCATCCACCACCTTCCCAGGATTACCACCATCCTCCACCTTCCCAGGATTACCATCCTCCTCCACCTTCCCACGATTATCATCCTCCTCCACCTTCCCACGATTATCCTCCTCCACCACCTTCCCACGATTACCATCCTCCACCTCCTTCCCAAGATTACCATCATCCTCCACCTGCCAGATCAGAAAGTTCCTATTCTGAGCTCTACAACCACCAGCAATACACACCAGATCAGTCACAGAATTTAGGTCCAAATTACCCTTCTCATGAAACTCCCCCTTCTTACTCTCTTCCCCATTTTCAATCTTATCCAAGTTTTTCAGAAAGCAGCCTACCATCAGTACCAGTAAACCATACTTATTATCAAGGATCTGATGCTTCATATTCTTCCCAGTCGGCTCCTCTGACTACAAACCATTCATCAAGTGTGCAACAAAGTTCCAGCAGCAGAAATGGAACTGTCTTGGAACCCAAGCCAACTACTAAGACATACCAGTACGACAGTAGCTACCAGCCAGCACCTGAAAAAATAGCAGAGGCACACAAGGCTGCAAGATTTGCTGTTGGGGCGCTGGCATTCGATGACGTCTCAATTGCAGTAGACTACTTGAAGAAATCACTTGAGTTGCTAACAAATCCATCGGTTGGCCAGTAA 1389 0.4492 MANENEPAKLLLPYLQRADELQKHEPLVSYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSVQLGLEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAATIFFEILNQFGPVQPDLEQKQKYAAWKAADIRKALKEGRKPMAGPPAGDEDLSVPASSPSNRYDIGTTETSASNAESDSDSTHSYHNPVNYQNMPSIHPAPKFHDTTVNDTQSYTPGVYPSQDFHPSPSSQDYHHPPPSQDYHHPPPSQDYHPPPPSHDYHPPPPSHDYPPPPPSHDYHPPPPSQDYHHPPPARSESSYSELYNHQQYTPDQSQNLGPNYPSHETPPSYSLPHFQSYPSFSESSLPSVPVNHTYYQGSDASYSSQSAPLTTNHSSSVQQSSSSRNGTVLEPKPTTKTYQYDSSYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSVGQ 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02078 462 MobiDBLite consensus disorder prediction 216 240 - -
Car02g02078 462 Gene3D Immunoglobulin FC, subunit C 418 457 - -
Car02g02078 462 MobiDBLite consensus disorder prediction 165 205 - -
Car02g02078 462 Pfam Vta1 C-terminal domain 419 456 IPR041212 -
Car02g02078 462 MobiDBLite consensus disorder prediction 251 300 - -
Car02g02078 462 Pfam Vta1 like 13 148 IPR039431 -
Car02g02078 462 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 1 325 IPR044538 GO:0032511
Car02g02078 462 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 284 459 IPR044538 GO:0032511
Car02g02078 462 MobiDBLite consensus disorder prediction 308 415 - -
Car02g02078 462 MobiDBLite consensus disorder prediction 149 416 - -
Car02g02078 462 Gene3D - 4 152 IPR023175 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02078 1 118 Glycosyltransferase AT2G31960 25.197 3.08e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02078 K12199 - gmx:100783739 668.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02078 02 51189429 51192820 Car02g02078 02 51189429 51192820 ECH