Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02075 ATGGAGCTCTGTACTACTCGAACCTTCACAActtctttctctcttccctcttcttcttcttcttctaattctcttcgttcCAACACTGTTATTAAACCCttccaattccaattcaaattcaaattcaattcCTTCAACCTTTCATCTTTCACTCCTCACATCCAACCCTCTCTCTCTATTCACActtcttctcccttcactatctcagcttcttcttcttcttcttcCGTCTCACTTGACTCTGAAAACGACCTTCTTCCAGCTCAATTGAAAGTCACCGAAACAGAGGAATCCGATTCCAGAGTTAGATTGCATGTGGAGGTGCCATCTTTGGTATGTGAGGATTGTTACAAAAGGGTCTTAGTTGAGTTTACGAAGTATGCAAAGGTACCTGGATTTCGTCCTGGAAAAACAGTCCCCGAAAGTATTCTTGTTGGTTATGTAGGGACTAGAAATGTTCAAAAGGCTACGATTGAATCTATATTGAGGAGGACACTTTCACACGCTGTGACATCGGTTACTGGAAGGGCTTTGCAGGACTCTGTAAGCATAGTTACTAAATTTTCTGAGATGGAGGACACATATTCTTCTCTTGGATATCTTAGCTATGAAGTCATTGTTGATGTTGCACCAGAAATCAAATGGATTTCTGATAACGCATACAAGAATTTGAAGGTTGTTGTTGAGATAGACAGTGATATAGATGCTCACATAGCATCTGAAAAAGAATTTAGAAGGCGTTACAAGTCTACAGGCGCACTGAAAGTTGTTACTGATAGAGGACTTCAGGTTGGTGATGTTGTTGTTATTGACATCTCAGCAACCACCATTGATCAAGATGAATCAAATATTAGAAATATTCCTTCTGCTGAAAGTAAAGGATTTAATTTTGATACAGAGGATGGTGAAATATTAGTACCAGGTTTCCTTGATTCTATAATTGGAATTCGTCGAGGCGAAGCAAAGTCATTTCACCTTTTTTTCCCAGAAACGTGGAAACAGGAAAATCTCCGTGGTGTTCATGCTCAGTTTACTGTTGAGTGCAAAGAACTTTTTTACAGAGATTTACCAGAGCTGGATGATTCTATTGCTGATAAGCTTATCCCTGGATGCACCACAGTGGAGCAGGTCAAAGACTTACTATTAGAGAGATTCCAAGAGGTGGAGCAAACAGCTAGGGAACAAGCAACTGATAATGCTATATTAGATCAGCTTTCTAAGATGGTAGAAGTTGATATACCTCGATCCTTGTTTGAGGAGCAAGGTAGACAGCTTTATGGAGCCAACCTATTAGAAATGCAGACAAAAATAAAATTAAATGAGCAGCAGCTGGCTTCTCTATCAAGTCCAAAGGCTGTGAATGAATATCTTGAGCATCAAAAGGAAAATATAACAAATTTGATCAAACAGAACCTGGCAGTTGGTGACATATATAGGCGTGAAAATCTGCAGCTTTCTACTGACGAGATCGTCAAAGAGGTTGAGAATTCTATTGCTGAATTCAAACGTCAAAAACAAGAGTATGACGAGGAACGAGTAAAGGATCAGGTTCAAGAAATACTTGAAGGAGCTAAGGTGCTTGAATGGTTGAGAGAACATGCAGACGTTCAGTATATAACAATTTGA 1626 0.3647 MELCTTRTFTTSFSLPSSSSSSNSLRSNTVIKPFQFQFKFKFNSFNLSSFTPHIQPSLSIHTSSPFTISASSSSSSVSLDSENDLLPAQLKVTETEESDSRVRLHVEVPSLVCEDCYKRVLVEFTKYAKVPGFRPGKTVPESILVGYVGTRNVQKATIESILRRTLSHAVTSVTGRALQDSVSIVTKFSEMEDTYSSLGYLSYEVIVDVAPEIKWISDNAYKNLKVVVEIDSDIDAHIASEKEFRRRYKSTGALKVVTDRGLQVGDVVVIDISATTIDQDESNIRNIPSAESKGFNFDTEDGEILVPGFLDSIIGIRRGEAKSFHLFFPETWKQENLRGVHAQFTVECKELFYRDLPELDDSIADKLIPGCTTVEQVKDLLLERFQEVEQTAREQATDNAILDQLSKMVEVDIPRSLFEEQGRQLYGANLLEMQTKIKLNEQQLASLSSPKAVNEYLEHQKENITNLIKQNLAVGDIYRRENLQLSTDEIVKEVENSIAEFKRQKQEYDEERVKDQVQEILEGAKVLEWLREHADVQYITI 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02075 541 Hamap Trigger factor [tig]. 90 537 IPR005215 GO:0015031
Car02g02075 541 Pfam Bacterial trigger factor protein (TF) C-terminus 373 530 IPR008880 GO:0006457|GO:0015031
Car02g02075 541 Gene3D - 250 357 IPR046357 GO:0003755
Car02g02075 541 MobiDBLite consensus disorder prediction 1 23 - -
Car02g02075 541 Gene3D - 88 213 IPR036611 GO:0006457|GO:0015031
Car02g02075 541 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 74 540 IPR005215 GO:0015031
Car02g02075 541 Gene3D - 220 536 IPR037041 GO:0006457|GO:0015031
Car02g02075 541 SUPERFAMILY FKBP-like 255 360 - -
Car02g02075 541 SUPERFAMILY Trigger factor ribosome-binding domain 90 223 IPR036611 GO:0006457|GO:0015031
Car02g02075 541 PANTHER TRIGGER FACTOR-LIKE PROTEIN TIG, CHLOROPLASTIC 74 540 - -
Car02g02075 541 Pfam Bacterial trigger factor protein (TF) 91 236 IPR008881 GO:0006457|GO:0015031
Car02g02075 541 TIGRFAM tig: trigger factor 101 530 IPR005215 GO:0015031
Car02g02075 541 Coils Coil 491 511 - -
Car02g02075 541 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 359 538 IPR027304 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02075 K03545 - gmx:100812597 803.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02075 02 51168476 51173354 Car02g02075 02 51168476 51173354 ECH