Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02073 atgaagacAGGCAAACTTGAAAAGAACACATGGTCTTTGACACTATGCCTTGTTTTACTTTCTCTCATTACAATCACCTTTCCCTTTTGTGAATCTTTCAACTATGGTCAAGCCTTGTCACACAGCCTTCTCTACTTTGAGGCACAACGTTCAGGTCACTTACCCTTCAACCAAAGGGTCAATTGGCGTCACCATTCTGGTCTCACTGATGGCCTAGAACAAGGGGTGGACTTGGTGGGAGGATACTATGATGCAGGGGACAATGTGAAATTTGGACTACCAATGGCGTTCACCATAACTCTCCTTTCATGGGCTGCTTTAGAATATGGCGAGCAAATCGCCGACGCCGGAGAGTACGTCCACACGATGGAGGCTATCAAGTGGGGAACCGACTATTTCATTAAAGCTCACACAGAACCAAATGTTCTATGGGTAGAGGTAGGTGACGGAGAAACTGACCATTACTGTTGGCAGAGACCAGAAGATATGACAACGTCACGAAGAGCTTATAAAATTGACAAAAACAACCCTGGCTCTGAAGTCGCCGGGGAAACCGCGGCAGCTTTGGCAGCTGCATCCATTTTATTTAGGAGAACAAATCCACATTACTCTCAACTACTATTGCATCATGCACAACAGTTGTTTGAGTTTGGAGACAAGTTTAAAGGCAAGTATGATGAAAGTATTGAAATTGCTAAAGGGTACTATACTTCAGTTAGTGGTTATAAGGATGAGTTGTTGTGGGCAGCCATATGGTTATATAGGGCAACCCAAAAGGATGAATATTTGAATTATGTTTTGGAGAATGCTCATGATTTTGGTGGGACCACTTGGGCCATGACAGAATTTAGTTGGGATGTTAAATATGTTGGTGTTCAAGTCATTGCTGCAACGCTCCTTATGGAAGAAAAGCACAAGAAACATGAAGTAATACTGAATAAATATCGTGAAAAAGCAGAGTACTATATTTGCTCATGTCTCAATCTCAACAAAGTGAATAATGTGGAACGCACACCAGGAGGGTTACTATATATCCGTCAATGGAACAATATGCAATATGTAGCAAATGCAGCTTTTCTTCTTACAATTTATTCAGATCATCTATTAGCCAATAATCAAAAATTGCATTGCCAAAAAAATGAGGTTGGTCCCAATGAAATTTTTGCCTTTGCAAAATCACAAGTTGATTACATTTTAGGTTCTAATCCAATGGGTATAAGTTATTTGGTTGGGTATGGTCCAAAATTCCCACAAAGGGTACACCATAGGGGTGCATCTATTAAATCATATAATAAAGGGAACATGGATTTTATTGGGTGCACTCAAGGTTATGAAAATTGGTATGAAAGTTCTGAGCCCAACCCAAATATACTCATTGGTGCACTTGTTGGTGGGCCTGATAATAAAGACCTATTTAAAGATGAAAGAAGAAATTATGAGCAAATGGAAGCTTGTACCTATAATACTGCTGCACTTGTAGGGGTTTTTGCTAGATTGTACAATTCTCAATTGGAAGGTGGTGTTTACAAAGATGAAAAACCTTTGCTGGATTCTAACTAA 1560 0.3968 MKTGKLEKNTWSLTLCLVLLSLITITFPFCESFNYGQALSHSLLYFEAQRSGHLPFNQRVNWRHHSGLTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTITLLSWAALEYGEQIADAGEYVHTMEAIKWGTDYFIKAHTEPNVLWVEVGDGETDHYCWQRPEDMTTSRRAYKIDKNNPGSEVAGETAAALAAASILFRRTNPHYSQLLLHHAQQLFEFGDKFKGKYDESIEIAKGYYTSVSGYKDELLWAAIWLYRATQKDEYLNYVLENAHDFGGTTWAMTEFSWDVKYVGVQVIAATLLMEEKHKKHEVILNKYREKAEYYICSCLNLNKVNNVERTPGGLLYIRQWNNMQYVANAAFLLTIYSDHLLANNQKLHCQKNEVGPNEIFAFAKSQVDYILGSNPMGISYLVGYGPKFPQRVHHRGASIKSYNKGNMDFIGCTQGYENWYESSEPNPNILIGALVGGPDNKDLFKDERRNYEQMEACTYNTAALVGVFARLYNSQLEGGVYKDEKPLLDSN 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02073 519 Gene3D - 31 503 IPR012341 GO:0005975
Car02g02073 519 PANTHER ENDOGLUCANASE 9 505 - -
Car02g02073 519 Pfam Glycosyl hydrolase family 9 35 495 IPR001701 GO:0004553|GO:0005975
Car02g02073 519 PANTHER ENDO-1,4-BETA-GLUCANASE 9 505 - -
Car02g02073 519 SUPERFAMILY Six-hairpin glycosidases 32 502 IPR008928 GO:0005975
Car02g02073 519 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 397 423 IPR018221 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02073 Car-Chr2 51153650 51157061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02073 15 498 Glycoside Hydrolase AT2G32990 69.043 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02073 - - gmx:100786912 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02073 02 51153650 51157061 Car02g02073 02 51153650 51157061 ECH