Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02054 ATGTTTGGTGTTGTAAGGCGAAGGGTTGCTTCTGGAGGCACATCTTCGTTGCTTGGTCAGTCAGGGCTGAAAATCCGGTCTGGCACTGCTAGAGTTTCTTCCGTTGTGGAAAAAGAGGTTGCATTTAGCTCAGGAGGATGTGGCAATATCCGGAATTTCTGTCACACAACACCTGGACGCTGGATTAATTCAAAACCTATAAGGGACATTTTTTATCAAGAGGCTTCCATTCAAACACAGAGGCATTCATTTTCTTCGGAAAGTGGAGATTCTGTTGATGTTGTGGTCCCTCCATTGGCTGAATCCATCGAAGATGGGACTCTCGCAAAATTCCTGAAGAGGGTTGGTGACAGGGTTAATATTGATGAACCAATTGCTCAAATTGAAACAGATAAGGTGACAATTGATGTTACAAGTCCCGAGTCAGGTGTGATTGTGAAGCTTCTAGCCAATGAAGGGGATACAGTTGAGCCAGGTCACAAGATAGCAATCATTTCAAGGTCTGCTGATGCTACAACTCATGTTGCGCCATCTGAGACTGCACCTGAGAAACCTGCTCCTAAGCCAACCCAAAATGTTAGTGAACCCGAGGAGAAGAAAGCTCCTAAAGTTGAAACAACTAAGACAGAGAAGCCAAAAGCACCTGCTCCACAAAGCTCTCCAAGTGAGCCACAGCTTCCTCCTAAGGAAAGAGAAAGACGAGTTCCTATGACAAGGCTTCGGAAACGGGTTGCTACACGGTTGAAGGATTCACAAAACACATTTGCTATGCTGACAACCTTCAATGAAGTTGATATGACTAATTTGATGAAGCTCCGTGCTGATTATAAGGATGCTTTTGTTGAGAAGCATGGAGTCAAATTGGGACTTATGTCCGGGTTTATCAAAGCTGCTGTCAATGCACTTCAAAATCAACCAATTATTAATGCAGTCATTGATGGGGATGATATTATATACAGAGATTATATAGATATCAGCATAGCTGTCGGAACTCCGAAGGGACTTGTTGTGCCAGTCATCCGCAATGCGGATACAATGAACTTTGCGGATATAGAAAAACAGATCAATGCTTTCGCAAAGAAGGCTAATGCTGGAACCTTATCAATTGATGAGATGGCTGGAGGCACTCTTACAATATCAAATGGCGGTGTTTATGGAAGTCTTTTGAGTACCCCTATTATCAACCCTCCTCAGTCGGCAATCTTGGGTATGCATTCCATAGTCAGCCGTCCAATGGTTGTTGGAGGAAATGTTGTTCCAAGGCCAATGATGTACACTGCTCTAACATATGACCACAGAATAATTGATGGAAGAGAGGCCGTGTTCTTTCTGCGACGCATCAAAGATATCGTGGAGGACCCTCGCAGGCTCTTGCTCGACATATAA 1386 0.4394 MFGVVRRRVASGGTSSLLGQSGLKIRSGTARVSSVVEKEVAFSSGGCGNIRNFCHTTPGRWINSKPIRDIFYQEASIQTQRHSFSSESGDSVDVVVPPLAESIEDGTLAKFLKRVGDRVNIDEPIAQIETDKVTIDVTSPESGVIVKLLANEGDTVEPGHKIAIISRSADATTHVAPSETAPEKPAPKPTQNVSEPEEKKAPKVETTKTEKPKAPAPQSSPSEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRADYKDAFVEKHGVKLGLMSGFIKAAVNALQNQPIINAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADTMNFADIEKQINAFAKKANAGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPMVVGGNVVPRPMMYTALTYDHRIIDGREAVFFLRRIKDIVEDPRRLLLDI 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02054 461 MobiDBLite consensus disorder prediction 169 237 - -
Car02g02054 461 TIGRFAM sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 199 460 IPR006255 GO:0004149|GO:0006099|GO:0045252
Car02g02054 461 Pfam Biotin-requiring enzyme 93 165 IPR000089 -
Car02g02054 461 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 231 459 IPR001078 GO:0016746
Car02g02054 461 Gene3D - 216 457 IPR023213 -
Car02g02054 461 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX 1, MITOCHONDRIAL-RELATED 1 461 - -
Car02g02054 461 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 1 461 - -
Car02g02054 461 CDD lipoyl_domain 92 165 - -
Car02g02054 461 SUPERFAMILY Single hybrid motif 92 183 IPR011053 -
Car02g02054 461 SUPERFAMILY CoA-dependent acyltransferases 231 460 - -
Car02g02054 461 MobiDBLite consensus disorder prediction 193 210 - -
Car02g02054 461 ProSiteProfiles Biotinyl/lipoyl domain profile. 91 166 IPR000089 -
Car02g02054 461 Gene3D - 90 168 - -
Car02g02054 461 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 116 145 IPR003016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02054 Car-Chr2 50985509 50991848 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02054 68 459 Acyl Lipid Metabolism Gene Families AT1G54220 28.384 1.68e-36 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02054 K00658 - gmx:100799149 704.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02054 02 50985509 50991848 Car02g02054 02 50985509 50991848 ECH