Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02051 ATGGAGGAGGACATGGACGAGATCGATGAAATTCCTCAGGTTTACATGGCTTGCATTCAATGCGGTCATAGAATAGGAGTTTCTTATTATGATTCCAGCCTTCGACAACTTTATGTGCTTGAAGCTTGGGATGATGGGGACAAAGGTTTTCCAGTTATTGATCTGGTGAAATATCAAGCAAACCCTTTGGTCATATACACAAGTACTAGATGTGAAGAATCTTTCTTGGCTGCTCTGCAACAAAGTGACGAAGTAGCTGAGGCTCCTACAGTAAAGCTTGTGAAAAGTTCAATATTCAGCTATGAGCAAGCATGGCACAGATTAATTTACCTTCGGGTTGCGGGAATGGATGATGGATTAGACGTCAAGGAGCGGATTTACTTTCTGAGTTCCATGATGGACATGGGAAGTGAAGTACAAGTTCGTGCCAGTGGTGGCCTTCTTGCGATATTAGAGAATGAAAGGGTTGTAGATACTCTTGAGCAAAAAGAATCTGGAAATACATCAATTATGATAGATTCTTTAGCTGAAATTTCACTAAATAGCTTTATCAAACTTGATGCAGCAGCTCATGAAGCACTACAAATATTCCAGATAGACAAGCACCCAAGCCACATGGGAATCGGTAGAGCAAAAGAAGGGTTTTCTGTATTTGGAATGATGAATAAGTGTGTCACTCCAATGGGCAGGCGTCTTTTGAGACACTGGTTCTTGAGGCCCATACTTGATCTTGATGTTCTAAACTACCGTTTAAATTCTATATCTTTCTTTCAATGCTCAGAAGAACTCGTTGCTTCTTTACGTGAAACCCTGAAATCTGTGAAGGACATTCCCTACTTGCTGAAGAAATTTGACTCTCCAAGCTCCATATGCACTAGCACTGATTGGACAGCACTTCTGAAGAGTATCAGTGCACTGTTGCATATAAACAAGATATTTGAAGTTGGAATTTCCGAAGGTCTTCAAGAAGAAATGAAGCACTTGAACTTGGATATTGTTGAGATGGCGAATTCATGCATAACAACAGAGCTTGCTTATGTCTATGAGCTGATAATTGGGGTTATAGATGTAAACAGAACTAAAGAGAAAGGATATACGACAGTGGTGAAAGAAGGTTTCTGTGATGAGTTGGATGAGCTAAGGCAAATATATGAGGAATTGCCCGAATTCCTGGAAGAGGTTTCGTCGTTGGAACTTGTACAACTCCCTGTTCTGTGCAAGGACAAGCTTGTTCCTTGTATTGTTTACATACAGCAAATTGGTAGATATTTAATGTGCCTCTTTGAAGAAAAACTTGAAGAAGCCACACTGGAGAAACTTACAGATTGGGAATACACATTTTGTGATGCAGATGGAGAGACAAAAAGATACTTTTATCGTACGCCAAAGACACGAGAATTGGACAGTCTTCTAGGAGATATCTATCATAAAATTCTAGATATGGAGAGGGCGATCACCAGAGACTTATTTTCCCGTGTATCATTGTTCTCATCCCATTTGCTAAAGGTGGCAACTTTTGCAGCTGAAATGGACTGCTTTTTGTCAATGGCTTTGGTTGCACGACAGAACAATTATGTCAGGCCTTTACTGACTGAAGAAAACTTGCTCGATATAAAAAATGGAAGGCATGTTTTACAGGAAATGACTGTAGACACATTTATTCCTAATGATACTAAGATTTTTCATGATGGAAGAGTTAATATCATTACTGGTCCTAATTTTTCTGGGAAGAGTATCTATATAAAACAGGTGGCTGTAATTGTTTTCCTGTCCCACATCGGTAGTTTTGTGCCAGCTGATGCAGCAACTGTTGGGCTGACAGATAGAATATTTTGTGCGACTGGAAGCCGGCTTATGACAGCAGAACAATCAACATTTATGATTGATCTACATCAAATTGGGATGATGCTGAGGCATGCTACTTCGCGATCTTTGTGTCTGGTGGATGAATTTGGTAAAGGTACTCTTACAGAAGACGGCGTTGGTCTGCTTGCTGGGGCTATAAATCACTTTGTCACATGTGATGAACCTCCAAAGGTTTTTGTGTGCACTCATCTGATGGATTTATTGCATGGATGTTCTTTGACCAAGTCTGAGCAGATTAAGTGCTACACAATGAGTATACTAGGGTCTGACGACAATTCCCCACATATCGAAGACATAATTTTTTTATATAGGCTTGTCCCCGGGCATGTGCATCATAGCTATGGTATGCTTTTGCTTTACTAG 2229 0.4015 MEEDMDEIDEIPQVYMACIQCGHRIGVSYYDSSLRQLYVLEAWDDGDKGFPVIDLVKYQANPLVIYTSTRCEESFLAALQQSDEVAEAPTVKLVKSSIFSYEQAWHRLIYLRVAGMDDGLDVKERIYFLSSMMDMGSEVQVRASGGLLAILENERVVDTLEQKESGNTSIMIDSLAEISLNSFIKLDAAAHEALQIFQIDKHPSHMGIGRAKEGFSVFGMMNKCVTPMGRRLLRHWFLRPILDLDVLNYRLNSISFFQCSEELVASLRETLKSVKDIPYLLKKFDSPSSICTSTDWTALLKSISALLHINKIFEVGISEGLQEEMKHLNLDIVEMANSCITTELAYVYELIIGVIDVNRTKEKGYTTVVKEGFCDELDELRQIYEELPEFLEEVSSLELVQLPVLCKDKLVPCIVYIQQIGRYLMCLFEEKLEEATLEKLTDWEYTFCDADGETKRYFYRTPKTRELDSLLGDIYHKILDMERAITRDLFSRVSLFSSHLLKVATFAAEMDCFLSMALVARQNNYVRPLLTEENLLDIKNGRHVLQEMTVDTFIPNDTKIFHDGRVNIITGPNFSGKSIYIKQVAVIVFLSHIGSFVPADAATVGLTDRIFCATGSRLMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDGVGLLAGAINHFVTCDEPPKVFVCTHLMDLLHGCSLTKSEQIKCYTMSILGSDDNSPHIEDIIFLYRLVPGHVHHSYGMLLLY 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02051 742 PANTHER MUTS PROTEIN HOMOLOG 5 21 738 - -
Car02g02051 742 SMART DNAend 212 549 IPR007696 GO:0005524|GO:0006298|GO:0030983
Car02g02051 742 Gene3D - 185 407 - -
Car02g02051 742 Pfam MutS domain V 568 738 IPR000432 GO:0005524|GO:0006298|GO:0030983
Car02g02051 742 SMART mutATP5 564 741 IPR000432 GO:0005524|GO:0006298|GO:0030983
Car02g02051 742 Pfam MutS domain III 191 517 IPR007696 GO:0005524|GO:0006298|GO:0030983
Car02g02051 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 525 739 IPR027417 -
Car02g02051 742 PIRSF MSH2 1 740 IPR011184 GO:0005524|GO:0006298|GO:0030983
Car02g02051 742 CDD ABC_MSH5_euk 537 737 - -
Car02g02051 742 SUPERFAMILY DNA repair protein MutS, domain III 187 524 IPR036187 -
Car02g02051 742 ProSitePatterns DNA mismatch repair proteins mutS family signature. 644 660 IPR000432 GO:0005524|GO:0006298|GO:0030983
Car02g02051 742 Gene3D - 525 741 IPR027417 -
Car02g02051 742 PANTHER DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER 21 738 IPR045076 GO:0005524|GO:0006298|GO:0030983|GO:0140664
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02051 K08741 - gmx:100794332 1296.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02051 02 50955285 50968679 Car02g02051 02 50955285 50968679 ECH