Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g02035 ATGAGTGTAGTAGGGTTTGATATTGGAAATGAGAATTGTGTTATTGCTGTAGTGAAGCAAGGTGGGGTTGATGTTTTGTTGAATGATGAATCGAACCGCGAAACCCCTGCGGTTGTCTGCTTTGGCGAGAAGCAACGGTTTTTAGGGTCTGCTGGTGCTGCTTCTGCTATGATGCATCCCAAATCGACGGTATCTCAAGTCAAGAGACTAATAGGAAGGAGATTTGCAGACCTTGATGTTCAAAATGATCTGAAAAGGCTCCCCATCGAAACTTCTGAAGGTTCAGATGGTGGCATTTTGATCCACTTGAAATATTTAAAGGAGACTCATAAGTTTACGCCGGTTCAAATATTAGCGATGCTCTTTGCCCACTTGAAGACTATAGCTGAAAACGATTTGGGGACCGCTGTTTCGGATTGTGTTATTGGAGTTCCGTCGTACTTTACTGACTTGCAGAGACGGGCGTATCTTGATGCTGCAACAATTGTTGGGTTGAAGCCTTTGAGGTTGTTTCATGATTGCACTGCAACTGGTCTTGGTTATGGTGTTTACAAAACAGATTTTCCCCAAGGAGGTCCTATTTATGTTGTGTTTATCGACATAGGTCAATGTGATACTCAGGTTTCTGTTGCAGCGTTTCAGGCTGGGAAAATGAAGATACTTTCACATGCTTTTGACAGGAACTTAGGGGGTAGAGACTTTGATGAGGTTCTATTTATACATTTTGCAGCAAAATTTAAGGAACAGTATAAAATTGATGTATATTCAAATGCAAGAGCGTGTAATAGGTTGCGTGCAGCGTGTGAGAAGTTGAAGAAAGTTTTGAGTGCGAATTTAGAAGCACCTCTTAACATTGAGTGTTTGATGGATGAAAAAGATGTTAGTGGATTTATCAAGAGGGAAGAATTTGAGAATCTTGCTGCAGGATTATTGGAGAGAATCTGTATTCCTTGCAACAAAGCATTGGCTGACGCGGGCTTGACTGTTGATAAGATGTATTCCGTTGAGTTAATTGGTTCAGGTTCAAGAATTCCAGCTATAGCTAGATTATTAACTTCTGTATTTAAGAGAGAACTCAGCCGAACGCTGAATGCAAGTGAGTGCGTAGCTCGTGGTTGCGCTCTGCAGTGTGCAATGCAGAGTCCTGTTTTCCGCATCAAAGAATATGAGGTCCAGGATTCTATTCCTTTTTCGATTGGACTTTCCTCTGATGAAGGTCCTATCTGTTTAAAATCAAATGGTGTACTTTTCCCAAAAGGCCAACCAATTCCAAGTTATAAAACACTTACGTTTCACGGCAGTAATTTTCTCCGTTTTGAAGCATTCTATGCTAATCCAGATGAAGTGCCAAAGGGGACATCTCCTAAAATTAGTTGCTTCACGATTGGTCCTTTGAATGGATCCCATGGAAGTAAGATGGGAGTTGAAGTTAGAATTCAACTAAATTTGCATGGCATTGTCAATATTGAATCATCTACATTGATCGAGGACCATGCGGAAGATTCGGTTACAACGCGTGATTGTCATTCAAATTCTGAAGCAATAGATGTCGAACCCATTTCTGAGACAGATCAAAATACCAATGAATATAGGAAAGATAAGAAGTGTGAGTCTTCACATCATTCTTCTGATGGTACAAGAAAAGATAAAGCCAACAAAAGGCTTCATGTGCCGGTGAGTGAGAACATCTACGGTGGAATGACACAGGCTGAAATCATAGAGGCTCAAGAACAAGAATGCCAATTAACACAGCAGGATAGAACAATGGAGTTAACCAAAGACAAGAGGAACTCTTTGGAGTCTTATGTCTATGACATGAGGAATAAGCTTTTCAACGAATACCGTAATTTTGCAAGTGAACAAGAGAGGGATGGCATATCAAGGAGCCTTCAAGAGACTGAGGAATGGCTTTACGATGAAGGAGATGATGAAACAGTACATGCTTATGCTGCAAAACTAGAAGATCTAAAACAGCTGGTGGATCCAATTGAGAACCGATGCAAAGATGAAGAAGCAAGAGTGCAAGCTACGAGAGATTTGTTAGGCTGCATTGTCGAGCATCGCATGTCTGCGGATTCTCTTCCACCCCAAAATAAAGAACTGGTTACCAATGAGTGCAATAAAGCAGAACAGTGGCTAAGAGAGAAGATGCAACAACAAGATGCTTTGCCTAAGAGCTCCGATCCAGTGTTTTGGTCAAGTGATATCAATAGCAAGACACAAGATTTAAATTTAGTATGCCAACAGATATTGAAAGACGAAGGGAAAGACAAGCAGAATGCTTCTAAGCATCAATGA 2298 0.4086 MSVVGFDIGNENCVIAVVKQGGVDVLLNDESNRETPAVVCFGEKQRFLGSAGAASAMMHPKSTVSQVKRLIGRRFADLDVQNDLKRLPIETSEGSDGGILIHLKYLKETHKFTPVQILAMLFAHLKTIAENDLGTAVSDCVIGVPSYFTDLQRRAYLDAATIVGLKPLRLFHDCTATGLGYGVYKTDFPQGGPIYVVFIDIGQCDTQVSVAAFQAGKMKILSHAFDRNLGGRDFDEVLFIHFAAKFKEQYKIDVYSNARACNRLRAACEKLKKVLSANLEAPLNIECLMDEKDVSGFIKREEFENLAAGLLERICIPCNKALADAGLTVDKMYSVELIGSGSRIPAIARLLTSVFKRELSRTLNASECVARGCALQCAMQSPVFRIKEYEVQDSIPFSIGLSSDEGPICLKSNGVLFPKGQPIPSYKTLTFHGSNFLRFEAFYANPDEVPKGTSPKISCFTIGPLNGSHGSKMGVEVRIQLNLHGIVNIESSTLIEDHAEDSVTTRDCHSNSEAIDVEPISETDQNTNEYRKDKKCESSHHSSDGTRKDKANKRLHVPVSENIYGGMTQAEIIEAQEQECQLTQQDRTMELTKDKRNSLESYVYDMRNKLFNEYRNFASEQERDGISRSLQETEEWLYDEGDDETVHAYAAKLEDLKQLVDPIENRCKDEEARVQATRDLLGCIVEHRMSADSLPPQNKELVTNECNKAEQWLREKMQQQDALPKSSDPVFWSSDINSKTQDLNLVCQQILKDEGKDKQNASKHQ 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g02035 765 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 765 - -
Car02g02035 765 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 600 IPR029047 -
Car02g02035 765 Pfam Hsp70 protein 3 666 IPR013126 GO:0005524|GO:0140662
Car02g02035 765 Gene3D Actin; Chain A, domain 4 230 313 - -
Car02g02035 765 SUPERFAMILY Actin-like ATPase domain 192 380 IPR043129 -
Car02g02035 765 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 570 666 IPR029048 -
Car02g02035 765 CDD HSPA4_like_NDB 2 381 - -
Car02g02035 765 Coils Coil 653 673 - -
Car02g02035 765 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Car02g02035 765 Gene3D - 38 113 - -
Car02g02035 765 PANTHER HSC70CB, ISOFORM G-RELATED 1 765 - -
Car02g02035 765 MobiDBLite consensus disorder prediction 525 556 - -
Car02g02035 765 PRINTS 70kDa heat shock protein signature 2 15 - -
Car02g02035 765 PRINTS 70kDa heat shock protein signature 30 42 - -
Car02g02035 765 PRINTS 70kDa heat shock protein signature 140 160 - -
Car02g02035 765 PRINTS 70kDa heat shock protein signature 332 348 - -
Car02g02035 765 PRINTS 70kDa heat shock protein signature 363 383 - -
Car02g02035 765 PRINTS 70kDa heat shock protein signature 388 407 - -
Car02g02035 765 PRINTS 70kDa heat shock protein signature 472 488 - -
Car02g02035 765 Gene3D - 186 360 - -
Car02g02035 765 Gene3D - 5 374 - -
Car02g02035 765 MobiDBLite consensus disorder prediction 500 556 - -
Car02g02035 765 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 543 IPR029047 -
Car02g02035 765 Gene3D - 567 678 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g02035 Car-Chr2 50823023 50826882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g02035 2 663 Miscellaneous Gene Families AT5G28540 29.646 3.50e-81 271
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g02035 K09489 - gmx:100795914 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g02035 02 50823023 50826882 Car02g02035 02 50823023 50826882 ECH