Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01727 ATGTCTATTCCAGTTGAAGGTTTCTTCAAGCAGAAAAAATACCCATTCATTCTAACTCTTTTTCTCTTACTCATCTCCCTCACACTCTTCCTCATCACCACCAACACCACCACTAACCCTCTTGTTTTCTACTCTAATCtcaaacatcaaaaactaccttcaaactcaaacatcaTTAACATAACAATTTCCAAGGAAGAAGAGGTTCTTCCTCGTGGTAATGATGTCAGTGTTATTGATTGGAAGCTTTGTAAGGATTCTGTGACTGTTGATTATATACCTTGTTTGGATAATTATAAAGCGATTATGGCTTTGAAATCAAGGAGGCATATGGAACATAGAGAAAGACATTGTCCTGTTGATGGTTTTCATTGTTTGTTGACTCTTCCTAAAGGGTATAAAGTTCGTCTTCCTTGGCCTAAGAGCAGGGACATGATTTGGTATGATAATACCCCTCATCCAAAGCTCGTCGAATACAAGAAAGACCAACACTGGGTTGTTAAATCCGGCGAATATCTCGTATTTCCCGGAGGTGGTACTCAATTCAAAGATGGAGTCGATCATTATATTCAGTTCATAGAGAAGACATTAACGTCGATTCAATGGGGAAAGCATATTCGAGTTGTTCTAGATGTCGGCTGCGGTGTTGCTAGTTTTGGTGGCTATCTGCTCGACAAAAATGTTATTACCATGTCATTTGCTCCAAAGGACGAACATGAAGCTCAGATACAGTTTGCTTTGGAGCGAGGAATTCCCGCAACTCTTGCGGTCATTGGAACACAAAAATTGACTTTTCCTGACAATGGTTTCGATTTGATCCATTGTGCACGATGTAGAGTTCATTGGGATGCAGATGGTGGGAAACCGTTATACGAACTTAATAGGATTCTTAGACCTGGTGGTTACTTTGCATGGTCTGCAACACCGGTTTATCGTGATGATGATCGAGATCAGAAAGTATGGAAAGCCATGGTGGCTATAACAAAAGCTATGTGCTGGAAGGTTGTGGCTAAGGCTCACGATTCGTCAGGAATTGGGCTTGTTATATACCAGAAGCCTACTTCATCTTCTTGCTATGAGAAACGTAAAGAGAACAATCCACCTTTATGTCAAAATCAGGATGGAAAAAATAGCTCATGGTATGCTCCACTCAATAGTTGCCTTACCCCTCTTCCAGTTGATGATAAGGGTAAACTGCAGAGCTGGCCGAAGCCTTGGCCTCAGAGGCTTACGAGTAAGCCCCCGAGCTTACCGGGTAATTCAGATGTCATCGACGAGTTCAACAAGGACAGCGACCGTTGGTCTCAACTAGTGTCAGATGTTTATAGGGACGGTCTTTCGATTAACTGGTCAAGTGTTCGAAATGTTATGGACATGAATGCCGGTTATGCAGGATTTGCGGCGGCTCTCATTGATCTACCAATTTGGGTTATGAATGTAGTCCCTATTGATGTGCCAGATACACTTTCTATTATAATGGACCGAGGATTAATAGGAATGTATCATGATTGGTGCGAGTCCTTTAACACCTATCCACGCACATATGACCTCCTTCATTCTAGCTTTCTTTTCAAACATCTTGAGCAAAGATGTGAGCTTGTAGATGTGGTTGTGGAGATAGACCGTATACTGAGACCAGGTGGATATCTTGTGATTCATGATTCCATGGAAATGCTTAGCAAACTCAGTCCAATCTTGCGTTCGCTTCAATGGTCTGTAACATTGCACCAAAAACAGTTTCTTGTTGGTAAGAAAAGTTTCTGGCGTCCCATGAGCTTTTGA 1782 0.4108 MSIPVEGFFKQKKYPFILTLFLLLISLTLFLITTNTTTNPLVFYSNLKHQKLPSNSNIINITISKEEEVLPRGNDVSVIDWKLCKDSVTVDYIPCLDNYKAIMALKSRRHMEHRERHCPVDGFHCLLTLPKGYKVRLPWPKSRDMIWYDNTPHPKLVEYKKDQHWVVKSGEYLVFPGGGTQFKDGVDHYIQFIEKTLTSIQWGKHIRVVLDVGCGVASFGGYLLDKNVITMSFAPKDEHEAQIQFALERGIPATLAVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLYELNRILRPGGYFAWSATPVYRDDDRDQKVWKAMVAITKAMCWKVVAKAHDSSGIGLVIYQKPTSSSCYEKRKENNPPLCQNQDGKNSSWYAPLNSCLTPLPVDDKGKLQSWPKPWPQRLTSKPPSLPGNSDVIDEFNKDSDRWSQLVSDVYRDGLSINWSSVRNVMDMNAGYAGFAAALIDLPIWVMNVVPIDVPDTLSIIMDRGLIGMYHDWCESFNTYPRTYDLLHSSFLFKHLEQRCELVDVVVEIDRILRPGGYLVIHDSMEMLSKLSPILRSLQWSVTLHQKQFLVGKKSFWRPMSF 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01727 593 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 91 579 IPR004159 GO:0008168
Car02g01727 593 Gene3D Vaccinia Virus protein VP39 417 584 IPR029063 -
Car02g01727 593 CDD AdoMet_MTases 209 303 - -
Car02g01727 593 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 314 IPR029063 -
Car02g01727 593 Gene3D Vaccinia Virus protein VP39 170 339 IPR029063 -
Car02g01727 593 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 4 592 IPR004159 GO:0008168
Car02g01727 593 PANTHER PMT16, PUTATIVE-RELATED 4 592 - -
Car02g01727 593 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 425 573 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01727 Car-Chr2 46378025 46382267 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01727 - - gmx:100800390 978.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01493 05 59232936 59240041 Car02g01727 02 46378025 46382267 PCT