Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01236 atgtCACTACCAAGGCTAGGAATAGGTGATGAGGAAGGTGAAAGTAATGTTACTTTATTGGTTTCTTCATCAACAACTATGGAAAGTGTGTGTTTGAATGTTTCAAAATCAAAACCAAAAGAGTTCAACTATATGGGATTGTCATGTGATTCTTCATCATCATCAGTGGAAAGTTCAGTTCCTATTCAATCTTTTTCAGATGAGACAAAAAGTAATTTGAATCTCAAAGCTACTGAGCTTAGATTGGGGATTCCAGGATCACAGTCTCCTGAAAGAGATTCTTCATCAGATCTTTGTTTGAGAAGTTCAACTAAGTTTGATGAAAAGACTCTTTTTCCTTTGCACCCTCAAAAAGATGATCATCATCTTTCTTCACCAAAGGTTGCTGTTTTGGGGAGCAAAAGAGGGTTTTCTGATGCCATGAATGTTTTCTCAGAGGGGAAATTGAAGCCTGGCTCCAAAATGCTTGAGAATGTTGGAGTCCATCAAGACAAAGGCAATGAAATAGCAATAGGCAAAGTTGCTCTTGAGAGGCCTCCTGGTGTCTGTGAAAGTAGACCAAATGTTAATGGTTCTTCAAATAATGGAAATAGCATTGCACCAGCTACCAAGGCACAGGTTGTTGGTTGGCCTCCAATAAGATCATTTAGGAAAAACTCATTGACAACAGCTTCAAAGAACAATGAAGAAGTTGATGAAAAAATGGGGTCTGCAGGAGGTGCTGTGTTTGTGAAGGTCAGCATGGATGGTGCTCCTTATTTAAGAAAAGTAGACTTGAAGAATTACACTGCATATTCACAACTATCTTCTGCTCTTGAGAAGATGTTCAGCTGTTTCACCATAGGTAGGTAG 852 0.3873 MSLPRLGIGDEEGESNVTLLVSSSTTMESVCLNVSKSKPKEFNYMGLSCDSSSSSVESSVPIQSFSDETKSNLNLKATELRLGIPGSQSPERDSSSDLCLRSSTKFDEKTLFPLHPQKDDHHLSSPKVAVLGSKRGFSDAMNVFSEGKLKPGSKMLENVGVHQDKGNEIAIGKVALERPPGVCESRPNVNGSSNNGNSIAPATKAQVVGWPPIRSFRKNSLTTASKNNEEVDEKMGSAGGAVFVKVSMDGAPYLRKVDLKNYTAYSQLSSALEKMFSCFTIGR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01236 283 PANTHER AUXIN-INDUCED PROTEIN 25 282 - -
Car02g01236 283 Pfam AUX/IAA family 77 282 IPR033389 -
Car02g01236 283 ProSiteProfiles PB1 domain profile. 241 283 IPR000270 GO:0005515
Car02g01236 283 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 25 282 IPR003311 GO:0005634|GO:0006355
Car02g01236 283 Gene3D - 237 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01236 Car-Chr2 37435202 37438983 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Car02g01236 AUX_IAA 4.4e-45 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01236 K14484 - gmx:100815447 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01236 02 37435202 37438983 Car02g01236 02 37435202 37438983 ECH