Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01186 ATGGCTTCACTCTCAACCATTTACTcatcatcaccaacactcaactatcaaaatcaccaAAACGCATCATCCCCTAACCCAATACGACGTCGTTCGAATCTCCCATTCTACCAAACCCGCCCTAACAAACTAACCCAAACCCGCTCCGTCGCGCGTGAACTTCCAACCGACCTAACTGCCGTTTCAAAAACAAGCCACCATCTCGAAAAGGAGCCACGCGCTTTATGGCGGCGCTACGTCGACTGGCTATACCAACACAAAGAAATCGGACTCTACCTCGATGTGAGTCGGGTCGGGTTTACCGATGAGTTTGTTGAAGAAATGGAGCCGAGGTTACAGGATGCGTTGAAGGCGATGGAGATGCTTGAGAAAGGTGCGATTGCGAATCCTGATGAAGGTCGTATGGTTGGACATTATTGGCTTAGGGATTCGAATCGTGCTCCTAATCCGTTTCTTAAGACGCAGATTGATACGACGCTTGATGCTATTTGTGGATTTGCTAATGATGTCGTCTCTGGTAAGATTAAGCCTCCATCATCTCCGGAGGGGCGGTTTACTCAGATACTTTCTGTTGGGATTGGAGGTTCTGCACTTGGACCACAGTTTGTTGCGGAAGCACTTGCTCCTGATAATCCTCCACTCAAGATAAGATTTATTGACAACACAGATCCTGCTGGCATTGATCATCAGATTGCACAACTCGGTTCTGAGCTAGCTTCAACACTAGTAATTGTGATTTCAAAGAGCGGAGGTACCCCTGAGACTAGAAATGGCTTGTTAGAAGTACAGAAGGCCTTTCGCGAAGCAGGATTGGATTTCCCAAAACAGGGTGTTGCTATAACACAAGAAAATTCTTTGTTGGATAATACTGCCAGAATTGAGGGATGGTTGGCTAGGTTTCCCATGTTTGACTGGGTGGGAGGTAGAACATCGGAGATGTCTGCAGTCGGCCTGCTTCCAGCAGCTCTGCAGAGCATTGACATTAGAGAAATGCTAGCTGGTGCATCACTGATGGATGAGGCCAATAGGAGTACTGTGATAAAGAATAATCCTGCAGCTTTACTGGCTTTATGTTGGTATTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATCCTTCCGTATAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAACTGGTCATGGAATCTCTGGGCAAGGAGTATGACTTGGATGGTAATCGGGTTAATCAAGGAATTAGTGTCTACGGAAATAAAGGAAGCACGGATCAACACGCCTACATTCAGCAACTGAGAGAAGGTGTACACAATTTCTTTGCGACATTCATTGAGGTGCTACGTGATAGACCTCCTGGTCATGATTGGGAGCTTGAACCAGGTGTTACATGTGGTGACTACCTGTTCGGTATGCTACAGGGAACAAGGTCAGCTTTGTATTCTAATGACCGTGAATCCATCACAGTCACAGTACAAGAAGTGACACCTAGATCAGTTGGTGCCCTTGTTGCACTGTATGAACGTGCAGTTGGAATATATGCCTCACTTGTCAACATAAATGCTTATCACCAGCCTGGTGTCGAAGCTGGTAAGAAAGCAGCAGGAGAAGTATTGGCACTTCAGAAGCGGGTGTTGGCAGTGTTAAACGAGGCAAGCTGCAAGGATCCTGTTGAACCATTGACAATTGAAGAAGTAGCTGAACGTTGCCATGCTCCAGAAGATATTGAAGTAATTTACAAGATTATTGCTCATATGGCTGCCAACGACAGAGCAATACTTGCTGAAGGTAGCTGTGGTTCTCCAAGGAGCATCAAAGTTTTTCTCGGAGAGTGTAATGTTGATGATCTGTATGCATGA 1845 0.4504 MASLSTIYSSSPTLNYQNHQNASSPNPIRRRSNLPFYQTRPNKLTQTRSVARELPTDLTAVSKTSHHLEKEPRALWRRYVDWLYQHKEIGLYLDVSRVGFTDEFVEEMEPRLQDALKAMEMLEKGAIANPDEGRMVGHYWLRDSNRAPNPFLKTQIDTTLDAICGFANDVVSGKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFIDNTDPAGIDHQIAQLGSELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQSIDIREMLAGASLMDEANRSTVIKNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEYDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYSNDRESITVTVQEVTPRSVGALVALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKDPVEPLTIEEVAERCHAPEDIEVIYKIIAHMAANDRAILAEGSCGSPRSIKVFLGECNVDDLYA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01186 614 CDD SIS_PGI_1 159 323 IPR035476 -
Car02g01186 614 Gene3D - 174 319 - -
Car02g01186 614 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 614 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 Gene3D - 320 519 - -
Car02g01186 614 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 614 - -
Car02g01186 614 Hamap Glucose-6-phosphate isomerase [pgi]. 88 537 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 PRINTS Glucose-6-phosphate isomerase signature 188 207 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 PRINTS Glucose-6-phosphate isomerase signature 300 318 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 PRINTS Glucose-6-phosphate isomerase signature 376 397 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 PRINTS Glucose-6-phosphate isomerase signature 478 496 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 PRINTS Glucose-6-phosphate isomerase signature 496 510 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 PRINTS Glucose-6-phosphate isomerase signature 510 523 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 MobiDBLite consensus disorder prediction 13 33 - -
Car02g01186 614 ProSitePatterns Phosphoglucose isomerase signature 2. 510 527 IPR018189 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 34 543 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 CDD SIS_PGI_2 369 533 IPR035482 -
Car02g01186 614 SUPERFAMILY SIS domain 72 537 IPR046348 GO:0097367|GO:1901135
Car02g01186 614 Pfam Phosphoglucose isomerase 475 535 IPR001672 GO:0004347|GO:0006094|GO:0006096
Car02g01186 614 Pfam Phosphoglucose isomerase 117 444 IPR001672 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01186 Car-Chr2 35775483 35783192 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01186 K01810 - gmx:100809452 1061.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01186 02 35775483 35783192 Car02g01186 02 35775483 35783192 ECH