Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01171 ATGAGAGAAAACCATCCTCAAAAAACAACAGAAGACGACAACAGATCTTCATCCATCCCAGATCTAGCAAGAGCCGAGATCGCCGAGTCATCAACCTCCAAAAACCGAACTGGTTTATCCGAACCGGTTCCCGGTTCAAATCAAACCGAAAACCCATCTCCTTTCCCAGACCAAGTTCTCGAGAACGTTCTAGAAAACGTCCTCCACTTCCTTTCCTCTCGCAAAGACCGAAACGCTGCCTCATTGGTCTGTCGCTCATGGTACCGTGCGGAAGCACTCACACGATCCGACCTCTTCATCGGAAACTGCTATGCAGTCTCCCCACGTCGGGCTACTAACCGTTTCAGCCGCATCAAGTCTGTAACCGTTAAGGGAAAGCCGCGTTTTGCGGATTTCGATCTGATGCCGGTTGATTGGGGGGCCCACTTCACTCCTTGGGTTAGTTCACTTGCTCAAGCTTACCCTTGGCTTGAAAAGCTTCACCTTAAACGTATGACTGTTACTGATGATAATCTCGCCGTTATCGCCGATTCGTTCGCTGGTTTTCGTGAACTTCTCCTTGTTTGCTGTGAAGGATTTGGTACCCCTGGTCTCGCTGCTATTGCTGCTAAGTGCAGATTACTGAGGGTGCTGGAACTTGTGGAATCTGTGATTGAAGTTGAGGATGATGAAGAGGTGGATTGGGTATCGTGTTTTCCGAATGAGGGTCAAACTCATTTGGAGTCTCTTGCTTTTGATTGTGTTGAGTGTCCAGTGAATTTTGAGGCATTGGAAGGGTTGGTGGCTAGATCGCCTTGTTTGAAGAAGCTTAGATTGAACCGATCTGTTTCCATGGCTCAGTTACATCGGCTAATGCTCCGTGCTCCACAGCTCACGCATCTTGGAACGGGCTCTTTCAGTGCTAATGAGAATGTGGATCAGGAACCTGATTATGCATCTGCCTTTGCAGCTTGCAGATCGTTGGTTTGTTTGTCTGGATTCAGGGAGATTTGGCCAGATTACCTTCCTGCTATTTATCCGGTTTGCGCGAACCTAACGTCGCTGAACTTTAGTTATGCTGATGTTAATGCAGAACAGCTGAAGTCTGTTATATGCCACTGTCATAATCTGCAGATATTGTGGGTCCTCGATTCAGTATGCGATGATGGTCTTCAGGCAGTGGCTGCAACTTGCAAGGACTTGCGCGAGCTTCGGGTTTTTCCAGTTGATGCGAGGGAGGAGACTGAAGGTCCTGTTTCTGAGAACTGCCCTGATCTTGTGGTGTTTCGCCTTTGTATAATTGGGGTGTATCGCCCCGATGCTGTAACACAAGAACCCATGGATGAAGGTTTTGGTGCTATTGTTATGAACTGCAAAAAGCTCACCCGCCTTGCTGTATCTGGTTTGCTGACTGATCGAGCTTTCGAATACATTGGGAGGTATGGGAAATTGATCAGGACACTGTCAGTTGCCTTTGCCGGAGACACCGACCTGGGCCTTAAGTATGTGCTTGAAGGGTGCCCTAATTTGAAGAAACTTGAAATCAGGGACAGTCCATTCGGTGATGGAGCTTTGCTATCAGGTTTGCATCATTACTACAACATGAGGTTTCTTTGGATGTCGTCCTGTAAATTAACTCGCCAAGCTTGCCAAGAAGTTGCACGAGCATTGCCCGGTCTGGTTTTGGAAGTTATTAACAACAACGAGGATGCAGTTAACGATATTGAAATATTGTACATGTATCGGTCTCTTGATGGACCACGGGATGATGCTCCGGAAAATGTTACCATCATGCAGTAG 1779 0.4739 MRENHPQKTTEDDNRSSSIPDLARAEIAESSTSKNRTGLSEPVPGSNQTENPSPFPDQVLENVLENVLHFLSSRKDRNAASLVCRSWYRAEALTRSDLFIGNCYAVSPRRATNRFSRIKSVTVKGKPRFADFDLMPVDWGAHFTPWVSSLAQAYPWLEKLHLKRMTVTDDNLAVIADSFAGFRELLLVCCEGFGTPGLAAIAAKCRLLRVLELVESVIEVEDDEEVDWVSCFPNEGQTHLESLAFDCVECPVNFEALEGLVARSPCLKKLRLNRSVSMAQLHRLMLRAPQLTHLGTGSFSANENVDQEPDYASAFAACRSLVCLSGFREIWPDYLPAIYPVCANLTSLNFSYADVNAEQLKSVICHCHNLQILWVLDSVCDDGLQAVAATCKDLRELRVFPVDAREETEGPVSENCPDLVVFRLCIIGVYRPDAVTQEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFEYIGRYGKLIRTLSVAFAGDTDLGLKYVLEGCPNLKKLEIRDSPFGDGALLSGLHHYYNMRFLWMSSCKLTRQACQEVARALPGLVLEVINNNEDAVNDIEILYMYRSLDGPRDDAPENVTIMQ 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01171 592 Pfam Transport inhibitor response 1 protein domain 117 162 IPR041101 -
Car02g01171 592 PANTHER F-BOX PROTEIN FBX14 45 414 - -
Car02g01171 592 PANTHER F-BOX PROTEIN FBX14 412 590 - -
Car02g01171 592 MobiDBLite consensus disorder prediction 1 19 - -
Car02g01171 592 Gene3D Ribonuclease Inhibitor 97 591 IPR032675 -
Car02g01171 592 MobiDBLite consensus disorder prediction 1 57 - -
Car02g01171 592 Gene3D - 46 95 - -
Car02g01171 592 MobiDBLite consensus disorder prediction 28 56 - -
Car02g01171 592 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 45 414 - -
Car02g01171 592 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 412 590 - -
Car02g01171 592 SUPERFAMILY RNI-like 83 553 - -
Car02g01171 592 SUPERFAMILY F-box domain 54 90 IPR036047 GO:0005515
Car02g01171 592 Pfam F-box 57 96 IPR041567 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01171 Car-Chr2 35064846 35067236 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car02g01171 - - gmx:100807836 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01171 02 35064846 35067236 Car02g01171 02 35064846 35067236 ECH